Protein–RNA interactions for Protein: Q5RKV6

EXOSC6, Exosome complex component MTR3, humanhuman

Known RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC6Q5RKV6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.25■□□□□ 0.51
EXOSC6Q5RKV6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EXOSC6Q5RKV6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
EXOSC6Q5RKV6 SOX15-203ENST00000570788 1093 ntBASIC18.25■□□□□ 0.51
EXOSC6Q5RKV6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.25■□□□□ 0.51
EXOSC6Q5RKV6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.25■□□□□ 0.51
EXOSC6Q5RKV6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
EXOSC6Q5RKV6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EXOSC6Q5RKV6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 UNC93B4-201ENST00000505679 747 ntBASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 AC008687.6-201ENST00000596318 630 ntBASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.24■□□□□ 0.51
EXOSC6Q5RKV6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 AC008403.3-201ENST00000598924 454 ntBASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 AL121829.2-201ENST00000620908 328 ntBASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
EXOSC6Q5RKV6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 AL121906.2-201ENST00000621597 723 ntBASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC6Q5RKV6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC6Q5RKV6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC6Q5RKV6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC6Q5RKV6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.21■□□□□ 0.51
EXOSC6Q5RKV6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
EXOSC6Q5RKV6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC6Q5RKV6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC6Q5RKV6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.21■□□□□ 0.51
EXOSC6Q5RKV6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC6Q5RKV6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
EXOSC6Q5RKV6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
EXOSC6Q5RKV6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC6Q5RKV6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms