Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 AC004264.1-201ENST00000608354 794 ntBASIC17.34■□□□□ 0.37
FREM1Q5H8C1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 AC125437.2-201ENST00000625180 2167 ntBASIC17.34■□□□□ 0.37
FREM1Q5H8C1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.34■□□□□ 0.37
FREM1Q5H8C1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FREM1Q5H8C1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
FREM1Q5H8C1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FREM1Q5H8C1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FREM1Q5H8C1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.33■□□□□ 0.37
FREM1Q5H8C1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
FREM1Q5H8C1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
FREM1Q5H8C1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
FREM1Q5H8C1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FREM1Q5H8C1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
FREM1Q5H8C1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FREM1Q5H8C1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
FREM1Q5H8C1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
FREM1Q5H8C1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
FREM1Q5H8C1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FREM1Q5H8C1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FREM1Q5H8C1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FREM1Q5H8C1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FREM1Q5H8C1 AL353807.1-201ENST00000427475 662 ntBASIC17.33■□□□□ 0.36
FREM1Q5H8C1 C1QL1P1-201ENST00000568105 661 ntBASIC17.33■□□□□ 0.36
FREM1Q5H8C1 AC073130.3-201ENST00000624389 2278 ntBASIC17.33■□□□□ 0.36
FREM1Q5H8C1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FREM1Q5H8C1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FREM1Q5H8C1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FREM1Q5H8C1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.33■□□□□ 0.36
FREM1Q5H8C1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 SNORA78-201ENST00000459373 127 ntBASIC17.32■□□□□ 0.36
FREM1Q5H8C1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 AC233702.5-201ENST00000584107 538 ntBASIC17.32■□□□□ 0.36
FREM1Q5H8C1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 AP006587.1-201ENST00000534129 1502 ntBASIC17.32■□□□□ 0.36
FREM1Q5H8C1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FREM1Q5H8C1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
FREM1Q5H8C1 NIFKP9-201ENST00000419265 221 ntBASIC17.3■□□□□ 0.36
FREM1Q5H8C1 AC113410.3-201ENST00000623366 203 ntBASIC17.3■□□□□ 0.36
FREM1Q5H8C1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms