Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 AC123595.1-201ENST00000440769 1046 ntBASIC17.53■□□□□ 0.4
CCDC58Q4VC31 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC58Q4VC31 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
CCDC58Q4VC31 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC58Q4VC31 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC58Q4VC31 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC58Q4VC31 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC58Q4VC31 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC58Q4VC31 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 PCDHB18P-201ENST00000524813 2368 ntBASIC17.51■□□□□ 0.39
CCDC58Q4VC31 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 AC142381.2-201ENST00000566120 298 ntBASIC17.51■□□□□ 0.39
CCDC58Q4VC31 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 TERF1P2-201ENST00000583350 1212 ntBASIC17.51■□□□□ 0.39
CCDC58Q4VC31 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 AP001271.2-201ENST00000624018 1556 ntBASIC17.51■□□□□ 0.39
CCDC58Q4VC31 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.51■□□□□ 0.39
CCDC58Q4VC31 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC58Q4VC31 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms