Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.28■□□□□ 0.52
RFX4Q33E94 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX4Q33E94 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.28■□□□□ 0.52
RFX4Q33E94 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX4Q33E94 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RFX4Q33E94 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX4Q33E94 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX4Q33E94 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX4Q33E94 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX4Q33E94 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RFX4Q33E94 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX4Q33E94 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX4Q33E94 CDV3P1-201ENST00000471403 739 ntBASIC18.27■□□□□ 0.52
RFX4Q33E94 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX4Q33E94 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX4Q33E94 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX4Q33E94 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX4Q33E94 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX4Q33E94 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX4Q33E94 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
RFX4Q33E94 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFX4Q33E94 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX4Q33E94 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFX4Q33E94 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.27■□□□□ 0.51
RFX4Q33E94 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
RFX4Q33E94 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
RFX4Q33E94 AC020763.4-201ENST00000623414 4170 ntBASIC18.27■□□□□ 0.51
RFX4Q33E94 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX4Q33E94 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX4Q33E94 KRT19P1-201ENST00000405746 1186 ntBASIC18.26■□□□□ 0.51
RFX4Q33E94 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX4Q33E94 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RFX4Q33E94 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RFX4Q33E94 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
RFX4Q33E94 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX4Q33E94 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFX4Q33E94 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFX4Q33E94 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFX4Q33E94 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RFX4Q33E94 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX4Q33E94 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 PGM5P4-201ENST00000421970 445 ntBASIC18.25■□□□□ 0.51
RFX4Q33E94 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX4Q33E94 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX4Q33E94 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX4Q33E94 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX4Q33E94 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX4Q33E94 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.24■□□□□ 0.51
RFX4Q33E94 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.24■□□□□ 0.51
RFX4Q33E94 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX4Q33E94 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX4Q33E94 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX4Q33E94 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX4Q33E94 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.24■□□□□ 0.51
RFX4Q33E94 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX4Q33E94 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RFX4Q33E94 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RFX4Q33E94 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
RFX4Q33E94 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX4Q33E94 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFX4Q33E94 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.24■□□□□ 0.51
RFX4Q33E94 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.24■□□□□ 0.51
RFX4Q33E94 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.24■□□□□ 0.51
RFX4Q33E94 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RFX4Q33E94 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX4Q33E94 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFX4Q33E94 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms