Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.22■□□□□ 0.67
CACNA1EQ15878 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.22■□□□□ 0.67
CACNA1EQ15878 PHGDH-210ENST00000641115 1638 ntBASIC19.22■□□□□ 0.67
CACNA1EQ15878 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CACNA1EQ15878 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1EQ15878 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1EQ15878 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1EQ15878 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.22■□□□□ 0.67
CACNA1EQ15878 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1EQ15878 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.22■□□□□ 0.67
CACNA1EQ15878 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1EQ15878 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.22■□□□□ 0.67
CACNA1EQ15878 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CACNA1EQ15878 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.22■□□□□ 0.67
CACNA1EQ15878 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1EQ15878 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1EQ15878 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CACNA1EQ15878 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1EQ15878 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.21■□□□□ 0.67
CACNA1EQ15878 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CACNA1EQ15878 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.21■□□□□ 0.67
CACNA1EQ15878 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA1EQ15878 HCG4P8-203ENST00000443049 980 ntBASIC19.21■□□□□ 0.67
CACNA1EQ15878 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.21■□□□□ 0.67
CACNA1EQ15878 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA1EQ15878 AC011298.2-201ENST00000617989 482 ntBASIC19.21■□□□□ 0.67
CACNA1EQ15878 AC130371.2-201ENST00000619443 611 ntBASIC19.21■□□□□ 0.67
CACNA1EQ15878 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.21■□□□□ 0.67
CACNA1EQ15878 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1EQ15878 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA1EQ15878 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA1EQ15878 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1EQ15878 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.2■□□□□ 0.66
CACNA1EQ15878 CCR12P-201ENST00000446203 998 ntBASIC19.2■□□□□ 0.66
CACNA1EQ15878 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
CACNA1EQ15878 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CACNA1EQ15878 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1EQ15878 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1EQ15878 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CACNA1EQ15878 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.2■□□□□ 0.66
CACNA1EQ15878 AL359075.1-203ENST00000462729 1002 ntBASIC19.2■□□□□ 0.66
CACNA1EQ15878 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.2■□□□□ 0.66
CACNA1EQ15878 AC139887.4-201ENST00000607877 719 ntBASIC19.2■□□□□ 0.66
CACNA1EQ15878 AC008622.2-201ENST00000617006 1229 ntBASIC19.2■□□□□ 0.66
CACNA1EQ15878 AL121956.5-201ENST00000625261 221 ntBASIC19.2■□□□□ 0.66
CACNA1EQ15878 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.2■□□□□ 0.66
CACNA1EQ15878 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1EQ15878 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CACNA1EQ15878 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1EQ15878 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1EQ15878 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1EQ15878 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1EQ15878 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CACNA1EQ15878 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1EQ15878 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1EQ15878 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.2■□□□□ 0.66
CACNA1EQ15878 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA1EQ15878 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 AC116562.4-202ENST00000641738 218 ntBASIC19.19■□□□□ 0.66
CACNA1EQ15878 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA1EQ15878 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA1EQ15878 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 AC026396.1-201ENST00000419388 421 ntBASIC19.19■□□□□ 0.66
CACNA1EQ15878 AL450487.1-201ENST00000426799 995 ntBASIC19.19■□□□□ 0.66
CACNA1EQ15878 TSPY17P-201ENST00000450329 467 ntBASIC19.19■□□□□ 0.66
CACNA1EQ15878 AC008040.2-201ENST00000461049 708 ntBASIC19.19■□□□□ 0.66
CACNA1EQ15878 AC091390.4-202ENST00000476426 537 ntBASIC19.19■□□□□ 0.66
CACNA1EQ15878 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 AC011558.1-201ENST00000623459 338 ntBASIC19.19■□□□□ 0.66
CACNA1EQ15878 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA1EQ15878 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.19■□□□□ 0.66
CACNA1EQ15878 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA1EQ15878 KRT16P6-202ENST00000425692 1426 ntBASIC19.18■□□□□ 0.66
CACNA1EQ15878 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1EQ15878 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1EQ15878 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1EQ15878 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.18■□□□□ 0.66
CACNA1EQ15878 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CACNA1EQ15878 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.18■□□□□ 0.66
CACNA1EQ15878 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1EQ15878 CLEC4GP1-201ENST00000596555 870 ntBASIC19.18■□□□□ 0.66
CACNA1EQ15878 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1EQ15878 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.18■□□□□ 0.66
CACNA1EQ15878 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1EQ15878 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CACNA1EQ15878 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.18■□□□□ 0.66
CACNA1EQ15878 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1EQ15878 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1EQ15878 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms