Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABREP78334 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABREP78334 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
GABREP78334 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABREP78334 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABREP78334 HMGA1P5-201ENST00000412453 271 ntBASIC18.72■□□□□ 0.59
GABREP78334 TUBB8P6-201ENST00000436895 1288 ntBASIC18.72■□□□□ 0.59
GABREP78334 YBX1P10-201ENST00000444752 975 ntBASIC18.72■□□□□ 0.59
GABREP78334 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GABREP78334 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GABREP78334 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.72■□□□□ 0.59
GABREP78334 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.72■□□□□ 0.59
GABREP78334 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.72■□□□□ 0.59
GABREP78334 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABREP78334 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.72■□□□□ 0.59
GABREP78334 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GABREP78334 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.72■□□□□ 0.59
GABREP78334 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
GABREP78334 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
GABREP78334 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABREP78334 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABREP78334 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.72■□□□□ 0.59
GABREP78334 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABREP78334 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GABREP78334 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
GABREP78334 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABREP78334 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABREP78334 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.71■□□□□ 0.59
GABREP78334 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.71■□□□□ 0.59
GABREP78334 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.71■□□□□ 0.59
GABREP78334 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.71■□□□□ 0.59
GABREP78334 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
GABREP78334 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GABREP78334 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.71■□□□□ 0.59
GABREP78334 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.71■□□□□ 0.59
GABREP78334 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABREP78334 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.71■□□□□ 0.59
GABREP78334 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.71■□□□□ 0.59
GABREP78334 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABREP78334 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
GABREP78334 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GABREP78334 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABREP78334 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.71■□□□□ 0.58
GABREP78334 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.71■□□□□ 0.58
GABREP78334 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
GABREP78334 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.7■□□□□ 0.58
GABREP78334 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.7■□□□□ 0.58
GABREP78334 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GABREP78334 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.7■□□□□ 0.58
GABREP78334 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.7■□□□□ 0.58
GABREP78334 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.7■□□□□ 0.58
GABREP78334 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
GABREP78334 AC139887.4-201ENST00000607877 719 ntBASIC18.7■□□□□ 0.58
GABREP78334 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.7■□□□□ 0.58
GABREP78334 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABREP78334 AL049796.1-201ENST00000565336 1766 ntBASIC18.7■□□□□ 0.58
GABREP78334 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GABREP78334 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
GABREP78334 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GABREP78334 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABREP78334 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABREP78334 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABREP78334 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABREP78334 AC116351.2-201ENST00000606540 1585 ntBASIC18.69■□□□□ 0.58
GABREP78334 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
GABREP78334 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABREP78334 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABREP78334 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.69■□□□□ 0.58
GABREP78334 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GABREP78334 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.69■□□□□ 0.58
GABREP78334 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
GABREP78334 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABREP78334 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABREP78334 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABREP78334 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABREP78334 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.69■□□□□ 0.58
GABREP78334 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.69■□□□□ 0.58
GABREP78334 KRT18P16-201ENST00000510337 1294 ntBASIC18.69■□□□□ 0.58
GABREP78334 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABREP78334 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.69■□□□□ 0.58
GABREP78334 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.69■□□□□ 0.58
GABREP78334 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.69■□□□□ 0.58
GABREP78334 AC116562.4-202ENST00000641738 218 ntBASIC18.69■□□□□ 0.58
GABREP78334 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.69■□□□□ 0.58
GABREP78334 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABREP78334 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GABREP78334 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms