Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRA2BP62995 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRA2BP62995 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRA2BP62995 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRA2BP62995 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.58■□□□□ 0.57
TRA2BP62995 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.58■□□□□ 0.57
TRA2BP62995 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRA2BP62995 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRA2BP62995 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRA2BP62995 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRA2BP62995 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRA2BP62995 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRA2BP62995 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRA2BP62995 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.58■□□□□ 0.56
TRA2BP62995 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TRA2BP62995 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRA2BP62995 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.58■□□□□ 0.56
TRA2BP62995 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.58■□□□□ 0.56
TRA2BP62995 UNC93B5-201ENST00000530315 699 ntBASIC18.58■□□□□ 0.56
TRA2BP62995 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.58■□□□□ 0.56
TRA2BP62995 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
TRA2BP62995 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.58■□□□□ 0.56
TRA2BP62995 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRA2BP62995 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRA2BP62995 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRA2BP62995 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRA2BP62995 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRA2BP62995 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.57■□□□□ 0.56
TRA2BP62995 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRA2BP62995 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRA2BP62995 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.57■□□□□ 0.56
TRA2BP62995 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.57■□□□□ 0.56
TRA2BP62995 YBX1P10-201ENST00000444752 975 ntBASIC18.57■□□□□ 0.56
TRA2BP62995 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.57■□□□□ 0.56
TRA2BP62995 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRA2BP62995 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 AP006587.1-201ENST00000534129 1502 ntBASIC18.57■□□□□ 0.56
TRA2BP62995 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.57■□□□□ 0.56
TRA2BP62995 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRA2BP62995 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRA2BP62995 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRA2BP62995 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
TRA2BP62995 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.56■□□□□ 0.56
TRA2BP62995 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRA2BP62995 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRA2BP62995 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRA2BP62995 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRA2BP62995 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRA2BP62995 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRA2BP62995 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRA2BP62995 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.56■□□□□ 0.56
TRA2BP62995 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.56■□□□□ 0.56
TRA2BP62995 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TRA2BP62995 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.56■□□□□ 0.56
TRA2BP62995 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.56■□□□□ 0.56
TRA2BP62995 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
TRA2BP62995 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.56■□□□□ 0.56
TRA2BP62995 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.56■□□□□ 0.56
TRA2BP62995 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRA2BP62995 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.56■□□□□ 0.56
TRA2BP62995 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRA2BP62995 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.56■□□□□ 0.56
TRA2BP62995 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRA2BP62995 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.56■□□□□ 0.56
TRA2BP62995 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRA2BP62995 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRA2BP62995 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.56■□□□□ 0.56
TRA2BP62995 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRA2BP62995 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRA2BP62995 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.56■□□□□ 0.56
TRA2BP62995 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.56■□□□□ 0.56
TRA2BP62995 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRA2BP62995 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRA2BP62995 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRA2BP62995 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRA2BP62995 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.55■□□□□ 0.56
TRA2BP62995 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRA2BP62995 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRA2BP62995 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRA2BP62995 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.55■□□□□ 0.56
TRA2BP62995 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRA2BP62995 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRA2BP62995 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRA2BP62995 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRA2BP62995 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRA2BP62995 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms