Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.29■□□□□ 0.84
EIF3EP60228 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3EP60228 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3EP60228 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
EIF3EP60228 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3EP60228 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3EP60228 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
EIF3EP60228 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.29■□□□□ 0.84
EIF3EP60228 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3EP60228 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.28■□□□□ 0.84
EIF3EP60228 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.28■□□□□ 0.84
EIF3EP60228 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3EP60228 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
EIF3EP60228 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
EIF3EP60228 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3EP60228 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3EP60228 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3EP60228 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3EP60228 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3EP60228 AL390719.1-204ENST00000412397 1219 ntBASIC20.28■□□□□ 0.84
EIF3EP60228 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.28■□□□□ 0.84
EIF3EP60228 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.28■□□□□ 0.84
EIF3EP60228 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.28■□□□□ 0.84
EIF3EP60228 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.28■□□□□ 0.84
EIF3EP60228 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.28■□□□□ 0.84
EIF3EP60228 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.28■□□□□ 0.84
EIF3EP60228 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3EP60228 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
EIF3EP60228 AC116351.2-201ENST00000606540 1585 ntBASIC20.28■□□□□ 0.84
EIF3EP60228 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3EP60228 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
EIF3EP60228 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
EIF3EP60228 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EIF3EP60228 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.27■□□□□ 0.84
EIF3EP60228 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3EP60228 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3EP60228 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3EP60228 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3EP60228 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3EP60228 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
EIF3EP60228 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
EIF3EP60228 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.27■□□□□ 0.84
EIF3EP60228 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.27■□□□□ 0.84
EIF3EP60228 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3EP60228 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.27■□□□□ 0.84
EIF3EP60228 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EIF3EP60228 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
EIF3EP60228 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
EIF3EP60228 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
EIF3EP60228 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
EIF3EP60228 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
EIF3EP60228 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3EP60228 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3EP60228 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.26■□□□□ 0.83
EIF3EP60228 AC018445.3-201ENST00000624177 1945 ntBASIC20.26■□□□□ 0.83
EIF3EP60228 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.26■□□□□ 0.83
EIF3EP60228 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.26■□□□□ 0.83
EIF3EP60228 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3EP60228 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.26■□□□□ 0.83
EIF3EP60228 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3EP60228 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
EIF3EP60228 AC005829.2-201ENST00000571422 1056 ntBASIC20.26■□□□□ 0.83
EIF3EP60228 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.26■□□□□ 0.83
EIF3EP60228 AC092118.2-201ENST00000613495 667 ntBASIC20.26■□□□□ 0.83
EIF3EP60228 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.26■□□□□ 0.83
EIF3EP60228 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3EP60228 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3EP60228 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
EIF3EP60228 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3EP60228 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EIF3EP60228 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
EIF3EP60228 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3EP60228 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.25■□□□□ 0.83
EIF3EP60228 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.25■□□□□ 0.83
EIF3EP60228 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.25■□□□□ 0.83
EIF3EP60228 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.25■□□□□ 0.83
EIF3EP60228 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3EP60228 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3EP60228 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3EP60228 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3EP60228 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3EP60228 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3EP60228 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.25■□□□□ 0.83
EIF3EP60228 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.25■□□□□ 0.83
EIF3EP60228 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.25■□□□□ 0.83
EIF3EP60228 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3EP60228 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3EP60228 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.25■□□□□ 0.83
EIF3EP60228 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3EP60228 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.25■□□□□ 0.83
EIF3EP60228 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3EP60228 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
EIF3EP60228 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EIF3EP60228 Z82202.1-201ENST00000623446 1880 ntBASIC20.24■□□□□ 0.83
EIF3EP60228 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EIF3EP60228 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms