Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.28■□□□□ 0.84
PMS2P54278 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PMS2P54278 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS2P54278 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS2P54278 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PMS2P54278 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS2P54278 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PMS2P54278 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.27■□□□□ 0.84
PMS2P54278 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.27■□□□□ 0.84
PMS2P54278 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.27■□□□□ 0.84
PMS2P54278 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.27■□□□□ 0.84
PMS2P54278 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.27■□□□□ 0.84
PMS2P54278 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS2P54278 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PMS2P54278 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.27■□□□□ 0.84
PMS2P54278 AL138781.2-201ENST00000617896 1843 ntBASIC20.27■□□□□ 0.84
PMS2P54278 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PMS2P54278 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PMS2P54278 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.27■□□□□ 0.83
PMS2P54278 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PMS2P54278 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PMS2P54278 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PMS2P54278 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.27■□□□□ 0.83
PMS2P54278 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PMS2P54278 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS2P54278 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.26■□□□□ 0.83
PMS2P54278 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS2P54278 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS2P54278 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.26■□□□□ 0.83
PMS2P54278 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.26■□□□□ 0.83
PMS2P54278 CROCCP5-201ENST00000436658 830 ntBASIC20.26■□□□□ 0.83
PMS2P54278 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.26■□□□□ 0.83
PMS2P54278 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.26■□□□□ 0.83
PMS2P54278 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS2P54278 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS2P54278 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PMS2P54278 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS2P54278 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS2P54278 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.26■□□□□ 0.83
PMS2P54278 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.25■□□□□ 0.83
PMS2P54278 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.25■□□□□ 0.83
PMS2P54278 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PMS2P54278 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.25■□□□□ 0.83
PMS2P54278 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.25■□□□□ 0.83
PMS2P54278 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.25■□□□□ 0.83
PMS2P54278 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.25■□□□□ 0.83
PMS2P54278 SLC7A5P1-201ENST00000568957 537 ntBASIC20.25■□□□□ 0.83
PMS2P54278 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.25■□□□□ 0.83
PMS2P54278 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.25■□□□□ 0.83
PMS2P54278 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.25■□□□□ 0.83
PMS2P54278 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PMS2P54278 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PMS2P54278 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 AC087633.2-202ENST00000565166 1439 ntBASIC20.25■□□□□ 0.83
PMS2P54278 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PMS2P54278 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS2P54278 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PMS2P54278 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PMS2P54278 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PMS2P54278 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PMS2P54278 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.24■□□□□ 0.83
PMS2P54278 AL109923.1-201ENST00000618799 583 ntBASIC20.24■□□□□ 0.83
PMS2P54278 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
PMS2P54278 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.24■□□□□ 0.83
PMS2P54278 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PMS2P54278 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PMS2P54278 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PMS2P54278 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PMS2P54278 PTBP1P-201ENST00000554374 1601 ntBASIC20.24■□□□□ 0.83
PMS2P54278 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS2P54278 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms