Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDX1P52945 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDX1P52945 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PDX1P52945 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.12■□□□□ 0.65
PDX1P52945 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDX1P52945 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.11■□□□□ 0.65
PDX1P52945 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PDX1P52945 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDX1P52945 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.11■□□□□ 0.65
PDX1P52945 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDX1P52945 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDX1P52945 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PDX1P52945 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDX1P52945 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDX1P52945 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.11■□□□□ 0.65
PDX1P52945 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.11■□□□□ 0.65
PDX1P52945 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDX1P52945 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDX1P52945 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDX1P52945 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDX1P52945 AP005212.1-201ENST00000581547 1997 ntBASIC19.11■□□□□ 0.65
PDX1P52945 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.11■□□□□ 0.65
PDX1P52945 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDX1P52945 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.11■□□□□ 0.65
PDX1P52945 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDX1P52945 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PDX1P52945 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDX1P52945 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDX1P52945 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDX1P52945 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDX1P52945 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.1■□□□□ 0.65
PDX1P52945 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDX1P52945 UNC93B2-201ENST00000285383 730 ntBASIC19.1■□□□□ 0.65
PDX1P52945 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDX1P52945 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDX1P52945 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.1■□□□□ 0.65
PDX1P52945 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.1■□□□□ 0.65
PDX1P52945 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.1■□□□□ 0.65
PDX1P52945 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDX1P52945 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDX1P52945 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.1■□□□□ 0.65
PDX1P52945 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDX1P52945 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDX1P52945 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
PDX1P52945 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 AL121603.2-201ENST00000557373 2117 ntBASIC19.09■□□□□ 0.65
PDX1P52945 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 NIFKP9-201ENST00000419265 221 ntBASIC19.09■□□□□ 0.65
PDX1P52945 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.09■□□□□ 0.65
PDX1P52945 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.09■□□□□ 0.65
PDX1P52945 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 KRT18P35-201ENST00000510488 1269 ntBASIC19.09■□□□□ 0.65
PDX1P52945 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.09■□□□□ 0.65
PDX1P52945 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.09■□□□□ 0.65
PDX1P52945 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PDX1P52945 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.09■□□□□ 0.65
PDX1P52945 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDX1P52945 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
PDX1P52945 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDX1P52945 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDX1P52945 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDX1P52945 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDX1P52945 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.08■□□□□ 0.64
PDX1P52945 HLA-G-202ENST00000376815 851 ntBASIC19.08■□□□□ 0.64
PDX1P52945 HLA-G-203ENST00000376818 1127 ntBASIC19.08■□□□□ 0.64
PDX1P52945 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.08■□□□□ 0.64
PDX1P52945 AL390955.1-201ENST00000428694 934 ntBASIC19.08■□□□□ 0.64
PDX1P52945 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDX1P52945 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.08■□□□□ 0.64
PDX1P52945 AL031963.3-201ENST00000606441 850 ntBASIC19.08■□□□□ 0.64
PDX1P52945 AC092865.7-201ENST00000641832 219 ntBASIC19.08■□□□□ 0.64
PDX1P52945 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.08■□□□□ 0.64
PDX1P52945 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDX1P52945 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.08■□□□□ 0.64
PDX1P52945 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDX1P52945 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDX1P52945 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PDX1P52945 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDX1P52945 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDX1P52945 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.08■□□□□ 0.64
PDX1P52945 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
PDX1P52945 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDX1P52945 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PDX1P52945 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms