Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC087289.5-201ENST00000586076 3175 ntBASIC18.39■□□□□ 0.53
SMSP52788 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.39■□□□□ 0.53
SMSP52788 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.39■□□□□ 0.53
SMSP52788 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMSP52788 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.38■□□□□ 0.53
SMSP52788 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMSP52788 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMSP52788 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.38■□□□□ 0.53
SMSP52788 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMSP52788 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.38■□□□□ 0.53
SMSP52788 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMSP52788 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMSP52788 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SMSP52788 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SMSP52788 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.38■□□□□ 0.53
SMSP52788 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.38■□□□□ 0.53
SMSP52788 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.38■□□□□ 0.53
SMSP52788 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.38■□□□□ 0.53
SMSP52788 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.38■□□□□ 0.53
SMSP52788 MIR4497-201ENST00000583208 89 ntBASIC18.38■□□□□ 0.53
SMSP52788 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.38■□□□□ 0.53
SMSP52788 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SMSP52788 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.38■□□□□ 0.53
SMSP52788 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMSP52788 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMSP52788 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMSP52788 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMSP52788 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.38■□□□□ 0.53
SMSP52788 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.38■□□□□ 0.53
SMSP52788 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.38■□□□□ 0.53
SMSP52788 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.38■□□□□ 0.53
SMSP52788 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SMSP52788 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.37■□□□□ 0.53
SMSP52788 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SMSP52788 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.37■□□□□ 0.53
SMSP52788 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SMSP52788 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.37■□□□□ 0.53
SMSP52788 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SMSP52788 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.37■□□□□ 0.53
SMSP52788 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.37■□□□□ 0.53
SMSP52788 RN7SL471P-201ENST00000580476 299 ntBASIC18.37■□□□□ 0.53
SMSP52788 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.37■□□□□ 0.53
SMSP52788 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.37■□□□□ 0.53
SMSP52788 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SMSP52788 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.37■□□□□ 0.53
SMSP52788 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.37■□□□□ 0.53
SMSP52788 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SMSP52788 AC125437.2-201ENST00000625180 2167 ntBASIC18.37■□□□□ 0.53
SMSP52788 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SMSP52788 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.37■□□□□ 0.53
SMSP52788 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SMSP52788 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMSP52788 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMSP52788 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMSP52788 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMSP52788 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SMSP52788 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMSP52788 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SMSP52788 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMSP52788 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMSP52788 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.36■□□□□ 0.53
SMSP52788 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SMSP52788 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMSP52788 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.36■□□□□ 0.53
SMSP52788 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.36■□□□□ 0.53
SMSP52788 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMSP52788 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.36■□□□□ 0.53
SMSP52788 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.36■□□□□ 0.53
SMSP52788 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.36■□□□□ 0.53
SMSP52788 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.36■□□□□ 0.53
SMSP52788 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.36■□□□□ 0.53
SMSP52788 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.36■□□□□ 0.53
SMSP52788 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.36■□□□□ 0.53
SMSP52788 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.36■□□□□ 0.53
SMSP52788 AC073912.3-201ENST00000624414 853 ntBASIC18.36■□□□□ 0.53
SMSP52788 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMSP52788 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SMSP52788 AC018445.3-201ENST00000624177 1945 ntBASIC18.35■□□□□ 0.53
SMSP52788 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.35■□□□□ 0.53
SMSP52788 BX323043.1-201ENST00000641006 1765 ntBASIC18.35■□□□□ 0.53
SMSP52788 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.35■□□□□ 0.53
SMSP52788 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms