Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR2JP52435 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2JP52435 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.8■□□□□ 0.6
POLR2JP52435 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2JP52435 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2JP52435 AC137761.2-201ENST00000561729 223 ntBASIC18.8■□□□□ 0.6
POLR2JP52435 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.8■□□□□ 0.6
POLR2JP52435 AC145350.3-201ENST00000569033 163 ntBASIC18.8■□□□□ 0.6
POLR2JP52435 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR2JP52435 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
POLR2JP52435 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2JP52435 CYP2T3P-201ENST00000601990 817 ntBASIC18.8■□□□□ 0.6
POLR2JP52435 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR2JP52435 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2JP52435 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2JP52435 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2JP52435 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2JP52435 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2JP52435 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
POLR2JP52435 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2JP52435 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
POLR2JP52435 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2JP52435 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
POLR2JP52435 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2JP52435 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2JP52435 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
POLR2JP52435 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2JP52435 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
POLR2JP52435 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
POLR2JP52435 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2JP52435 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
POLR2JP52435 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR2JP52435 CNN2P6-201ENST00000439038 900 ntBASIC18.79■□□□□ 0.6
POLR2JP52435 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.79■□□□□ 0.6
POLR2JP52435 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR2JP52435 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2JP52435 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2JP52435 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2JP52435 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2JP52435 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR2JP52435 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2JP52435 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2JP52435 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
POLR2JP52435 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.78■□□□□ 0.6
POLR2JP52435 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2JP52435 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2JP52435 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR2JP52435 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
POLR2JP52435 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2JP52435 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
POLR2JP52435 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2JP52435 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
POLR2JP52435 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2JP52435 AC023632.3-201ENST00000521633 145 ntBASIC18.78■□□□□ 0.6
POLR2JP52435 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.78■□□□□ 0.6
POLR2JP52435 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR2JP52435 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.78■□□□□ 0.6
POLR2JP52435 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.78■□□□□ 0.6
POLR2JP52435 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2JP52435 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
POLR2JP52435 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2JP52435 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
POLR2JP52435 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2JP52435 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2JP52435 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.78■□□□□ 0.6
POLR2JP52435 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2JP52435 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2JP52435 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
POLR2JP52435 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2JP52435 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
POLR2JP52435 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2JP52435 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.77■□□□□ 0.6
POLR2JP52435 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2JP52435 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
POLR2JP52435 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
POLR2JP52435 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2JP52435 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
POLR2JP52435 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2JP52435 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2JP52435 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2JP52435 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
POLR2JP52435 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2JP52435 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR2JP52435 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR2JP52435 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.77■□□□□ 0.6
POLR2JP52435 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.77■□□□□ 0.6
POLR2JP52435 DUX4L16-201ENST00000555130 1264 ntBASIC18.77■□□□□ 0.6
POLR2JP52435 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR2JP52435 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.77■□□□□ 0.6
POLR2JP52435 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.77■□□□□ 0.6
POLR2JP52435 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR2JP52435 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2JP52435 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
POLR2JP52435 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
POLR2JP52435 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2JP52435 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
POLR2JP52435 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2JP52435 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR2JP52435 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.77■□□□□ 0.59
POLR2JP52435 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms