Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 RCC2P6-201ENST00000526625 1557 ntBASIC21.79■■□□□ 1.08
CDK7P50613 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
CDK7P50613 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK7P50613 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.79■■□□□ 1.08
CDK7P50613 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDK7P50613 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.79■■□□□ 1.08
CDK7P50613 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.79■■□□□ 1.08
CDK7P50613 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.79■■□□□ 1.08
CDK7P50613 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK7P50613 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CDK7P50613 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK7P50613 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK7P50613 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK7P50613 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK7P50613 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
CDK7P50613 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.78■■□□□ 1.08
CDK7P50613 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK7P50613 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK7P50613 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDK7P50613 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK7P50613 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK7P50613 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK7P50613 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDK7P50613 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.78■■□□□ 1.08
CDK7P50613 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK7P50613 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.78■■□□□ 1.08
CDK7P50613 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.78■■□□□ 1.08
CDK7P50613 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.78■■□□□ 1.08
CDK7P50613 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.78■■□□□ 1.08
CDK7P50613 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.78■■□□□ 1.08
CDK7P50613 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDK7P50613 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.78■■□□□ 1.08
CDK7P50613 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK7P50613 AC005229.4-201ENST00000610085 2198 ntBASIC21.78■■□□□ 1.08
CDK7P50613 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDK7P50613 AC018553.1-201ENST00000616682 1458 ntBASIC21.77■■□□□ 1.08
CDK7P50613 AC096733.2-201ENST00000609937 1394 ntBASIC21.77■■□□□ 1.08
CDK7P50613 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.77■■□□□ 1.08
CDK7P50613 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
CDK7P50613 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.77■■□□□ 1.08
CDK7P50613 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK7P50613 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK7P50613 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.77■■□□□ 1.08
CDK7P50613 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK7P50613 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK7P50613 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK7P50613 TSPY5P-201ENST00000426936 936 ntBASIC21.77■■□□□ 1.08
CDK7P50613 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.77■■□□□ 1.08
CDK7P50613 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.77■■□□□ 1.08
CDK7P50613 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.77■■□□□ 1.08
CDK7P50613 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDK7P50613 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.77■■□□□ 1.08
CDK7P50613 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDK7P50613 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.77■■□□□ 1.08
CDK7P50613 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
CDK7P50613 AC011298.2-201ENST00000617989 482 ntBASIC21.77■■□□□ 1.08
CDK7P50613 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.77■■□□□ 1.08
CDK7P50613 AC116562.4-202ENST00000641738 218 ntBASIC21.77■■□□□ 1.08
CDK7P50613 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK7P50613 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDK7P50613 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.77■■□□□ 1.08
CDK7P50613 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CDK7P50613 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDK7P50613 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDK7P50613 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.77■■□□□ 1.07
CDK7P50613 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK7P50613 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDK7P50613 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.76■■□□□ 1.07
CDK7P50613 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK7P50613 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK7P50613 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK7P50613 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK7P50613 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CDK7P50613 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
CDK7P50613 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.76■■□□□ 1.07
CDK7P50613 YBX1P2-201ENST00000489612 999 ntBASIC21.76■■□□□ 1.07
CDK7P50613 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.76■■□□□ 1.07
CDK7P50613 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.76■■□□□ 1.07
CDK7P50613 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.76■■□□□ 1.07
CDK7P50613 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.76■■□□□ 1.07
CDK7P50613 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK7P50613 FBXW4P1-201ENST00000426721 2239 ntBASIC21.76■■□□□ 1.07
CDK7P50613 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CDK7P50613 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.76■■□□□ 1.07
CDK7P50613 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK7P50613 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK7P50613 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDK7P50613 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.75■■□□□ 1.07
CDK7P50613 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDK7P50613 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDK7P50613 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDK7P50613 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDK7P50613 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDK7P50613 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDK7P50613 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDK7P50613 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDK7P50613 AC004951.3-201ENST00000418645 1148 ntBASIC21.75■■□□□ 1.07
CDK7P50613 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDK7P50613 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.75■■□□□ 1.07
CDK7P50613 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms