Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GSK3AP49840 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GSK3AP49840 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GSK3AP49840 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GSK3AP49840 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GSK3AP49840 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GSK3AP49840 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GSK3AP49840 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GSK3AP49840 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
GSK3AP49840 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.13■□□□□ 0.33
GSK3AP49840 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 TREX1-205ENST00000625293 1783 ntBASIC17.12■□□□□ 0.33
GSK3AP49840 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.12■□□□□ 0.33
GSK3AP49840 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.12■□□□□ 0.33
GSK3AP49840 SLC29A4P1-201ENST00000398760 971 ntBASIC17.12■□□□□ 0.33
GSK3AP49840 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.12■□□□□ 0.33
GSK3AP49840 NCF1B-203ENST00000435988 1254 ntBASIC17.12■□□□□ 0.33
GSK3AP49840 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.12■□□□□ 0.33
GSK3AP49840 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.12■□□□□ 0.33
GSK3AP49840 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.12■□□□□ 0.33
GSK3AP49840 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.12■□□□□ 0.33
GSK3AP49840 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.12■□□□□ 0.33
GSK3AP49840 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.12■□□□□ 0.33
GSK3AP49840 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.12■□□□□ 0.33
GSK3AP49840 AC092666.2-201ENST00000613287 246 ntBASIC17.12■□□□□ 0.33
GSK3AP49840 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.12■□□□□ 0.33
GSK3AP49840 AP000974.1-201ENST00000623909 2387 ntBASIC17.12■□□□□ 0.33
GSK3AP49840 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GSK3AP49840 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.12■□□□□ 0.33
GSK3AP49840 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GSK3AP49840 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.12■□□□□ 0.33
GSK3AP49840 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
GSK3AP49840 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GSK3AP49840 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GSK3AP49840 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.11■□□□□ 0.33
GSK3AP49840 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GSK3AP49840 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GSK3AP49840 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GSK3AP49840 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.11■□□□□ 0.33
GSK3AP49840 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GSK3AP49840 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GSK3AP49840 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GSK3AP49840 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
GSK3AP49840 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.11■□□□□ 0.33
GSK3AP49840 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
GSK3AP49840 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.11■□□□□ 0.33
GSK3AP49840 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GSK3AP49840 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GSK3AP49840 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
GSK3AP49840 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GSK3AP49840 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GSK3AP49840 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.11■□□□□ 0.33
GSK3AP49840 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GSK3AP49840 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
GSK3AP49840 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GSK3AP49840 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GSK3AP49840 AP001271.2-201ENST00000624018 1556 ntBASIC17.11■□□□□ 0.33
GSK3AP49840 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
GSK3AP49840 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.1■□□□□ 0.33
GSK3AP49840 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.1■□□□□ 0.33
GSK3AP49840 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.1■□□□□ 0.33
GSK3AP49840 DUSP5P2-201ENST00000426873 1033 ntBASIC17.1■□□□□ 0.33
GSK3AP49840 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GSK3AP49840 TSPY6P-201ENST00000448518 926 ntBASIC17.1■□□□□ 0.33
GSK3AP49840 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.1■□□□□ 0.33
GSK3AP49840 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.1■□□□□ 0.33
GSK3AP49840 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.1■□□□□ 0.33
GSK3AP49840 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.1■□□□□ 0.33
GSK3AP49840 AC092118.2-201ENST00000613495 667 ntBASIC17.1■□□□□ 0.33
GSK3AP49840 AC093484.2-201ENST00000580996 2166 ntBASIC17.1■□□□□ 0.33
GSK3AP49840 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
GSK3AP49840 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.1■□□□□ 0.33
GSK3AP49840 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSK3AP49840 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
GSK3AP49840 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms