Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTNNA1P35221 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.74■□□□□ 0.91
CTNNA1P35221 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CTNNA1P35221 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CTNNA1P35221 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.74■□□□□ 0.91
CTNNA1P35221 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.74■□□□□ 0.91
CTNNA1P35221 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
CTNNA1P35221 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 RARRES2P6-201ENST00000567333 442 ntBASIC20.74■□□□□ 0.91
CTNNA1P35221 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.74■□□□□ 0.91
CTNNA1P35221 AL589743.5-201ENST00000616611 1050 ntBASIC20.74■□□□□ 0.91
CTNNA1P35221 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNNA1P35221 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.74■□□□□ 0.91
CTNNA1P35221 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNNA1P35221 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNNA1P35221 Z82202.1-201ENST00000623446 1880 ntBASIC20.73■□□□□ 0.91
CTNNA1P35221 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTNNA1P35221 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTNNA1P35221 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CTNNA1P35221 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTNNA1P35221 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CTNNA1P35221 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTNNA1P35221 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNNA1P35221 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTNNA1P35221 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.73■□□□□ 0.91
CTNNA1P35221 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.73■□□□□ 0.91
CTNNA1P35221 AC007322.1-201ENST00000426983 750 ntBASIC20.73■□□□□ 0.91
CTNNA1P35221 AC023632.3-201ENST00000521633 145 ntBASIC20.73■□□□□ 0.91
CTNNA1P35221 C2orf69P4-201ENST00000565394 541 ntBASIC20.73■□□□□ 0.91
CTNNA1P35221 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNNA1P35221 PHGDH-210ENST00000641115 1638 ntBASIC20.73■□□□□ 0.91
CTNNA1P35221 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CTNNA1P35221 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CTNNA1P35221 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTNNA1P35221 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTNNA1P35221 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNNA1P35221 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CTNNA1P35221 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTNNA1P35221 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CTNNA1P35221 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.72■□□□□ 0.91
CTNNA1P35221 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNNA1P35221 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNNA1P35221 AC120498.9-201ENST00000339021 3867 ntBASIC20.72■□□□□ 0.91
CTNNA1P35221 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNNA1P35221 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNNA1P35221 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNNA1P35221 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.72■□□□□ 0.91
CTNNA1P35221 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNNA1P35221 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNNA1P35221 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.72■□□□□ 0.91
CTNNA1P35221 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.72■□□□□ 0.91
CTNNA1P35221 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.72■□□□□ 0.91
CTNNA1P35221 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.72■□□□□ 0.91
CTNNA1P35221 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNNA1P35221 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.72■□□□□ 0.91
CTNNA1P35221 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNNA1P35221 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CTNNA1P35221 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNNA1P35221 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNNA1P35221 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNNA1P35221 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.72■□□□□ 0.91
CTNNA1P35221 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNNA1P35221 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CTNNA1P35221 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CTNNA1P35221 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.71■□□□□ 0.91
CTNNA1P35221 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.71■□□□□ 0.91
CTNNA1P35221 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CTNNA1P35221 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CTNNA1P35221 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CTNNA1P35221 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.71■□□□□ 0.91
CTNNA1P35221 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.71■□□□□ 0.91
CTNNA1P35221 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTNNA1P35221 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms