Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-FP30511 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.02■□□□□ 0.8
HLA-FP30511 AC116562.2-201ENST00000507042 360 ntBASIC20.02■□□□□ 0.8
HLA-FP30511 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-FP30511 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.02■□□□□ 0.8
HLA-FP30511 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.02■□□□□ 0.8
HLA-FP30511 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-FP30511 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.02■□□□□ 0.8
HLA-FP30511 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.02■□□□□ 0.8
HLA-FP30511 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.02■□□□□ 0.8
HLA-FP30511 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-FP30511 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-FP30511 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-FP30511 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-FP30511 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.02■□□□□ 0.79
HLA-FP30511 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-FP30511 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-FP30511 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.02■□□□□ 0.79
HLA-FP30511 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-FP30511 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-FP30511 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-FP30511 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.02■□□□□ 0.79
HLA-FP30511 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-FP30511 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-FP30511 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.01■□□□□ 0.79
HLA-FP30511 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-FP30511 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-FP30511 AC079598.2-202ENST00000546624 1451 ntBASIC20.01■□□□□ 0.79
HLA-FP30511 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-FP30511 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-FP30511 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-FP30511 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-FP30511 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.01■□□□□ 0.79
HLA-FP30511 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.01■□□□□ 0.79
HLA-FP30511 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.01■□□□□ 0.79
HLA-FP30511 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-FP30511 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.01■□□□□ 0.79
HLA-FP30511 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-FP30511 LINC01023-201ENST00000606054 436 ntBASIC20.01■□□□□ 0.79
HLA-FP30511 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.01■□□□□ 0.79
HLA-FP30511 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-FP30511 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-FP30511 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-FP30511 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-FP30511 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-FP30511 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.01■□□□□ 0.79
HLA-FP30511 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-FP30511 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-FP30511 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-FP30511 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HLA-FP30511 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20■□□□□ 0.79
HLA-FP30511 AC099778.1-201ENST00000568593 1911 ntBASIC20■□□□□ 0.79
HLA-FP30511 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-FP30511 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20■□□□□ 0.79
HLA-FP30511 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-FP30511 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-FP30511 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20■□□□□ 0.79
HLA-FP30511 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20■□□□□ 0.79
HLA-FP30511 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-FP30511 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20■□□□□ 0.79
HLA-FP30511 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20■□□□□ 0.79
HLA-FP30511 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20■□□□□ 0.79
HLA-FP30511 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20■□□□□ 0.79
HLA-FP30511 AC133561.5-201ENST00000635547 218 ntBASIC20■□□□□ 0.79
HLA-FP30511 AL031985.4-201ENST00000642138 673 ntBASIC20■□□□□ 0.79
HLA-FP30511 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-FP30511 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-FP30511 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20■□□□□ 0.79
HLA-FP30511 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20■□□□□ 0.79
HLA-FP30511 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-FP30511 PKD1P6-201ENST00000343738 4769 ntBASIC19.99■□□□□ 0.79
HLA-FP30511 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-FP30511 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-FP30511 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-FP30511 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-FP30511 UNC93B2-201ENST00000285383 730 ntBASIC19.99■□□□□ 0.79
HLA-FP30511 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-FP30511 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-FP30511 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-FP30511 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-FP30511 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HLA-FP30511 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-FP30511 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.99■□□□□ 0.79
HLA-FP30511 AP000525.1-201ENST00000608286 694 ntBASIC19.99■□□□□ 0.79
HLA-FP30511 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-FP30511 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HLA-FP30511 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-FP30511 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-FP30511 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-FP30511 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-FP30511 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-FP30511 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
HLA-FP30511 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-FP30511 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-FP30511 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HLA-FP30511 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-FP30511 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-FP30511 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-FP30511 MMP23A-201ENST00000234610 1017 ntBASIC19.98■□□□□ 0.79
HLA-FP30511 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms