Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
LAMA1P25391 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LAMA1P25391 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LAMA1P25391 HMGA1P5-201ENST00000412453 271 ntBASIC19.34■□□□□ 0.69
LAMA1P25391 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.34■□□□□ 0.69
LAMA1P25391 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LAMA1P25391 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LAMA1P25391 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.34■□□□□ 0.69
LAMA1P25391 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
LAMA1P25391 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LAMA1P25391 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LAMA1P25391 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.34■□□□□ 0.69
LAMA1P25391 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.34■□□□□ 0.69
LAMA1P25391 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.34■□□□□ 0.69
LAMA1P25391 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.34■□□□□ 0.69
LAMA1P25391 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.34■□□□□ 0.69
LAMA1P25391 AC092667.1-201ENST00000434301 2586 ntBASIC19.34■□□□□ 0.69
LAMA1P25391 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LAMA1P25391 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.34■□□□□ 0.69
LAMA1P25391 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
LAMA1P25391 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LAMA1P25391 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LAMA1P25391 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LAMA1P25391 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
LAMA1P25391 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LAMA1P25391 AC018553.1-201ENST00000616682 1458 ntBASIC19.33■□□□□ 0.69
LAMA1P25391 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LAMA1P25391 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.33■□□□□ 0.69
LAMA1P25391 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.33■□□□□ 0.69
LAMA1P25391 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LAMA1P25391 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LAMA1P25391 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LAMA1P25391 MFAP1P1-201ENST00000442257 1255 ntBASIC19.33■□□□□ 0.68
LAMA1P25391 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.33■□□□□ 0.68
LAMA1P25391 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LAMA1P25391 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LAMA1P25391 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LAMA1P25391 LINC00565-201ENST00000562710 2331 ntBASIC19.33■□□□□ 0.68
LAMA1P25391 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMA1P25391 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.32■□□□□ 0.68
LAMA1P25391 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LAMA1P25391 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMA1P25391 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMA1P25391 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMA1P25391 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.32■□□□□ 0.68
LAMA1P25391 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.32■□□□□ 0.68
LAMA1P25391 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.32■□□□□ 0.68
LAMA1P25391 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
LAMA1P25391 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LAMA1P25391 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.32■□□□□ 0.68
LAMA1P25391 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.32■□□□□ 0.68
LAMA1P25391 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMA1P25391 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMA1P25391 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.32■□□□□ 0.68
LAMA1P25391 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMA1P25391 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.32■□□□□ 0.68
LAMA1P25391 AL359075.1-203ENST00000462729 1002 ntBASIC19.32■□□□□ 0.68
LAMA1P25391 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.32■□□□□ 0.68
LAMA1P25391 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LAMA1P25391 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LAMA1P25391 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.32■□□□□ 0.68
LAMA1P25391 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LAMA1P25391 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LAMA1P25391 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LAMA1P25391 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LAMA1P25391 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.31■□□□□ 0.68
LAMA1P25391 SLC25A1P2-201ENST00000430693 912 ntBASIC19.31■□□□□ 0.68
LAMA1P25391 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
LAMA1P25391 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LAMA1P25391 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LAMA1P25391 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LAMA1P25391 AP006587.1-201ENST00000534129 1502 ntBASIC19.31■□□□□ 0.68
LAMA1P25391 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
LAMA1P25391 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LAMA1P25391 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.31■□□□□ 0.68
LAMA1P25391 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LAMA1P25391 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LAMA1P25391 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.31■□□□□ 0.68
LAMA1P25391 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LAMA1P25391 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.31■□□□□ 0.68
LAMA1P25391 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.31■□□□□ 0.68
LAMA1P25391 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LAMA1P25391 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LAMA1P25391 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LAMA1P25391 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LAMA1P25391 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LAMA1P25391 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.3■□□□□ 0.68
LAMA1P25391 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.3■□□□□ 0.68
LAMA1P25391 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LAMA1P25391 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.3■□□□□ 0.68
LAMA1P25391 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LAMA1P25391 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LAMA1P25391 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LAMA1P25391 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LAMA1P25391 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.3■□□□□ 0.68
LAMA1P25391 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LAMA1P25391 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.3■□□□□ 0.68
LAMA1P25391 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LAMA1P25391 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.29■□□□□ 0.68
LAMA1P25391 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms