Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN1P18031 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PTPN1P18031 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN1P18031 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PTPN1P18031 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PTPN1P18031 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PTPN1P18031 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
PTPN1P18031 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PTPN1P18031 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 KRT18P16-201ENST00000510337 1294 ntBASIC20.86■□□□□ 0.93
PTPN1P18031 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.86■□□□□ 0.93
PTPN1P18031 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.86■□□□□ 0.93
PTPN1P18031 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.86■□□□□ 0.93
PTPN1P18031 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.86■□□□□ 0.93
PTPN1P18031 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PTPN1P18031 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN1P18031 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN1P18031 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PTPN1P18031 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PTPN1P18031 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN1P18031 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN1P18031 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN1P18031 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN1P18031 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN1P18031 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
PTPN1P18031 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN1P18031 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN1P18031 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN1P18031 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN1P18031 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.85■□□□□ 0.93
PTPN1P18031 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN1P18031 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN1P18031 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN1P18031 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN1P18031 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PTPN1P18031 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN1P18031 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN1P18031 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPN1P18031 TMEM179-206ENST00000616017 1645 ntBASIC20.85■□□□□ 0.93
PTPN1P18031 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPN1P18031 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN1P18031 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PTPN1P18031 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PTPN1P18031 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PTPN1P18031 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN1P18031 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.84■□□□□ 0.93
PTPN1P18031 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.84■□□□□ 0.93
PTPN1P18031 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.84■□□□□ 0.93
PTPN1P18031 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN1P18031 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN1P18031 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PTPN1P18031 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN1P18031 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN1P18031 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN1P18031 AL596275.1-201ENST00000423464 877 ntBASIC20.84■□□□□ 0.93
PTPN1P18031 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN1P18031 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.84■□□□□ 0.93
PTPN1P18031 TUBB8P6-201ENST00000436895 1288 ntBASIC20.84■□□□□ 0.93
PTPN1P18031 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN1P18031 AF186192.3-201ENST00000583427 947 ntBASIC20.84■□□□□ 0.93
PTPN1P18031 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.84■□□□□ 0.93
PTPN1P18031 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN1P18031 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.84■□□□□ 0.93
PTPN1P18031 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN1P18031 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN1P18031 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN1P18031 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPN1P18031 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN1P18031 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN1P18031 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN1P18031 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPN1P18031 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.83■□□□□ 0.93
PTPN1P18031 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN1P18031 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN1P18031 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN1P18031 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPN1P18031 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.83■□□□□ 0.93
PTPN1P18031 AP001412.1-201ENST00000608405 714 ntBASIC20.83■□□□□ 0.93
PTPN1P18031 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN1P18031 AL049637.2-201ENST00000641778 930 ntBASIC20.83■□□□□ 0.93
PTPN1P18031 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN1P18031 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN1P18031 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms