Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
PDGFRAP16234 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDGFRAP16234 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
PDGFRAP16234 AL158211.5-201ENST00000623583 2518 ntBASIC20.66■□□□□ 0.9
PDGFRAP16234 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PDGFRAP16234 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PDGFRAP16234 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PDGFRAP16234 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFRAP16234 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PDGFRAP16234 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFRAP16234 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFRAP16234 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.65■□□□□ 0.9
PDGFRAP16234 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFRAP16234 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFRAP16234 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.65■□□□□ 0.9
PDGFRAP16234 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFRAP16234 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFRAP16234 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFRAP16234 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.65■□□□□ 0.9
PDGFRAP16234 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PDGFRAP16234 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFRAP16234 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.65■□□□□ 0.9
PDGFRAP16234 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.65■□□□□ 0.9
PDGFRAP16234 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.65■□□□□ 0.9
PDGFRAP16234 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.65■□□□□ 0.9
PDGFRAP16234 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.65■□□□□ 0.9
PDGFRAP16234 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PDGFRAP16234 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.65■□□□□ 0.9
PDGFRAP16234 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFRAP16234 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFRAP16234 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFRAP16234 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFRAP16234 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PDGFRAP16234 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.64■□□□□ 0.9
PDGFRAP16234 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PDGFRAP16234 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFRAP16234 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFRAP16234 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.64■□□□□ 0.89
PDGFRAP16234 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFRAP16234 PRORSD1P-201ENST00000295112 541 ntBASIC20.64■□□□□ 0.89
PDGFRAP16234 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFRAP16234 AC128676.1-201ENST00000454392 318 ntBASIC20.64■□□□□ 0.89
PDGFRAP16234 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.64■□□□□ 0.89
PDGFRAP16234 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.64■□□□□ 0.89
PDGFRAP16234 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.64■□□□□ 0.89
PDGFRAP16234 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.64■□□□□ 0.89
PDGFRAP16234 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.64■□□□□ 0.89
PDGFRAP16234 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PDGFRAP16234 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFRAP16234 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFRAP16234 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFRAP16234 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFRAP16234 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.63■□□□□ 0.89
PDGFRAP16234 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFRAP16234 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PDGFRAP16234 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFRAP16234 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFRAP16234 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.63■□□□□ 0.89
PDGFRAP16234 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFRAP16234 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.63■□□□□ 0.89
PDGFRAP16234 AC073648.6-201ENST00000641589 218 ntBASIC20.63■□□□□ 0.89
PDGFRAP16234 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFRAP16234 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PDGFRAP16234 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFRAP16234 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
PDGFRAP16234 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.63■□□□□ 0.89
PDGFRAP16234 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFRAP16234 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PDGFRAP16234 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PDGFRAP16234 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.62■□□□□ 0.89
PDGFRAP16234 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PDGFRAP16234 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.62■□□□□ 0.89
PDGFRAP16234 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.62■□□□□ 0.89
PDGFRAP16234 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PDGFRAP16234 AL121906.2-201ENST00000621597 723 ntBASIC20.62■□□□□ 0.89
PDGFRAP16234 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PDGFRAP16234 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PDGFRAP16234 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PDGFRAP16234 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFRAP16234 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.62■□□□□ 0.89
PDGFRAP16234 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.62■□□□□ 0.89
PDGFRAP16234 TREX1-205ENST00000625293 1783 ntBASIC20.62■□□□□ 0.89
PDGFRAP16234 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
PDGFRAP16234 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFRAP16234 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
PDGFRAP16234 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms