Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.17■□□□□ 0.5
UBL4AP11441 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.17■□□□□ 0.5
UBL4AP11441 AP001271.2-201ENST00000624018 1556 ntBASIC18.17■□□□□ 0.5
UBL4AP11441 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.17■□□□□ 0.5
UBL4AP11441 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.17■□□□□ 0.5
UBL4AP11441 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.17■□□□□ 0.5
UBL4AP11441 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.17■□□□□ 0.5
UBL4AP11441 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
UBL4AP11441 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.17■□□□□ 0.5
UBL4AP11441 PNMA6B-201ENST00000538162 1200 ntBASIC18.17■□□□□ 0.5
UBL4AP11441 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.17■□□□□ 0.5
UBL4AP11441 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.17■□□□□ 0.5
UBL4AP11441 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.17■□□□□ 0.5
UBL4AP11441 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
UBL4AP11441 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
UBL4AP11441 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 AC009237.14-201ENST00000609975 1594 ntBASIC18.17■□□□□ 0.5
UBL4AP11441 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.17■□□□□ 0.5
UBL4AP11441 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL4AP11441 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBL4AP11441 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UBL4AP11441 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBL4AP11441 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL4AP11441 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL4AP11441 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBL4AP11441 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL4AP11441 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.16■□□□□ 0.5
UBL4AP11441 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL4AP11441 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL4AP11441 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.16■□□□□ 0.5
UBL4AP11441 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
UBL4AP11441 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.16■□□□□ 0.5
UBL4AP11441 AC006557.6-201ENST00000623071 864 ntBASIC18.16■□□□□ 0.5
UBL4AP11441 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL4AP11441 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL4AP11441 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL4AP11441 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.16■□□□□ 0.5
UBL4AP11441 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
UBL4AP11441 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL4AP11441 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.16■□□□□ 0.5
UBL4AP11441 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
UBL4AP11441 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.15■□□□□ 0.5
UBL4AP11441 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.15■□□□□ 0.5
UBL4AP11441 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.15■□□□□ 0.5
UBL4AP11441 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.15■□□□□ 0.5
UBL4AP11441 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.15■□□□□ 0.5
UBL4AP11441 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
UBL4AP11441 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.15■□□□□ 0.5
UBL4AP11441 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.15■□□□□ 0.5
UBL4AP11441 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.15■□□□□ 0.5
UBL4AP11441 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.15■□□□□ 0.5
UBL4AP11441 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.15■□□□□ 0.5
UBL4AP11441 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
UBL4AP11441 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
UBL4AP11441 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.15■□□□□ 0.5
UBL4AP11441 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
UBL4AP11441 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.15■□□□□ 0.5
UBL4AP11441 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
UBL4AP11441 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBL4AP11441 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBL4AP11441 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBL4AP11441 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
UBL4AP11441 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
UBL4AP11441 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.14■□□□□ 0.5
UBL4AP11441 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.14■□□□□ 0.5
UBL4AP11441 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBL4AP11441 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UBL4AP11441 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.14■□□□□ 0.49
UBL4AP11441 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBL4AP11441 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBL4AP11441 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
UBL4AP11441 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.14■□□□□ 0.49
UBL4AP11441 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBL4AP11441 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms