Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RARAP10276 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.64■□□□□ 0.89
RARAP10276 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RARAP10276 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RARAP10276 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RARAP10276 PHGDH-210ENST00000641115 1638 ntBASIC20.64■□□□□ 0.89
RARAP10276 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.63■□□□□ 0.89
RARAP10276 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RARAP10276 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.63■□□□□ 0.89
RARAP10276 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.63■□□□□ 0.89
RARAP10276 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RARAP10276 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.63■□□□□ 0.89
RARAP10276 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RARAP10276 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.63■□□□□ 0.89
RARAP10276 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.63■□□□□ 0.89
RARAP10276 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.63■□□□□ 0.89
RARAP10276 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.63■□□□□ 0.89
RARAP10276 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.63■□□□□ 0.89
RARAP10276 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.63■□□□□ 0.89
RARAP10276 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
RARAP10276 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.63■□□□□ 0.89
RARAP10276 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
RARAP10276 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
RARAP10276 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.63■□□□□ 0.89
RARAP10276 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARAP10276 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RARAP10276 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
RARAP10276 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RARAP10276 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RARAP10276 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.62■□□□□ 0.89
RARAP10276 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RARAP10276 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RARAP10276 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RARAP10276 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RARAP10276 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RARAP10276 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RARAP10276 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RARAP10276 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RARAP10276 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RARAP10276 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.62■□□□□ 0.89
RARAP10276 AC005829.2-201ENST00000571422 1056 ntBASIC20.62■□□□□ 0.89
RARAP10276 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.62■□□□□ 0.89
RARAP10276 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.62■□□□□ 0.89
RARAP10276 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
RARAP10276 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.62■□□□□ 0.89
RARAP10276 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.62■□□□□ 0.89
RARAP10276 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RARAP10276 AP001271.2-201ENST00000624018 1556 ntBASIC20.62■□□□□ 0.89
RARAP10276 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.62■□□□□ 0.89
RARAP10276 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RARAP10276 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.61■□□□□ 0.89
RARAP10276 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RARAP10276 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.61■□□□□ 0.89
RARAP10276 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.61■□□□□ 0.89
RARAP10276 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RARAP10276 Z82202.1-201ENST00000623446 1880 ntBASIC20.61■□□□□ 0.89
RARAP10276 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.61■□□□□ 0.89
RARAP10276 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RARAP10276 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RARAP10276 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RARAP10276 AC097658.1-201ENST00000475555 843 ntBASIC20.61■□□□□ 0.89
RARAP10276 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.61■□□□□ 0.89
RARAP10276 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RARAP10276 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.61■□□□□ 0.89
RARAP10276 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RARAP10276 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.61■□□□□ 0.89
RARAP10276 AC104771.1-201ENST00000603335 964 ntBASIC20.61■□□□□ 0.89
RARAP10276 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RARAP10276 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RARAP10276 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RARAP10276 TNXA-203ENST00000507684 2038 ntBASIC20.61■□□□□ 0.89
RARAP10276 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RARAP10276 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.61■□□□□ 0.89
RARAP10276 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.61■□□□□ 0.89
RARAP10276 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARAP10276 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RARAP10276 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
RARAP10276 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARAP10276 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.6■□□□□ 0.89
RARAP10276 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARAP10276 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.6■□□□□ 0.89
RARAP10276 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.6■□□□□ 0.89
RARAP10276 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARAP10276 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARAP10276 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.6■□□□□ 0.89
RARAP10276 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms