Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.17■□□□□ 0.98
C4BPAP04003 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
C4BPAP04003 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
C4BPAP04003 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C4BPAP04003 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.17■□□□□ 0.98
C4BPAP04003 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
C4BPAP04003 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C4BPAP04003 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.17■□□□□ 0.98
C4BPAP04003 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C4BPAP04003 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
C4BPAP04003 AL158211.5-201ENST00000623583 2518 ntBASIC21.16■□□□□ 0.98
C4BPAP04003 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
C4BPAP04003 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C4BPAP04003 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
C4BPAP04003 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C4BPAP04003 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
C4BPAP04003 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.16■□□□□ 0.98
C4BPAP04003 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
C4BPAP04003 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C4BPAP04003 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.16■□□□□ 0.98
C4BPAP04003 KRASP1-201ENST00000407852 552 ntBASIC21.16■□□□□ 0.98
C4BPAP04003 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.16■□□□□ 0.98
C4BPAP04003 KRT18P16-201ENST00000510337 1294 ntBASIC21.16■□□□□ 0.98
C4BPAP04003 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.16■□□□□ 0.98
C4BPAP04003 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.16■□□□□ 0.98
C4BPAP04003 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.16■□□□□ 0.98
C4BPAP04003 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
C4BPAP04003 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.16■□□□□ 0.98
C4BPAP04003 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C4BPAP04003 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C4BPAP04003 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.16■□□□□ 0.98
C4BPAP04003 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.16■□□□□ 0.98
C4BPAP04003 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C4BPAP04003 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C4BPAP04003 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
C4BPAP04003 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
C4BPAP04003 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4BPAP04003 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4BPAP04003 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4BPAP04003 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
C4BPAP04003 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.15■□□□□ 0.98
C4BPAP04003 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4BPAP04003 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.15■□□□□ 0.98
C4BPAP04003 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
C4BPAP04003 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.15■□□□□ 0.98
C4BPAP04003 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.15■□□□□ 0.98
C4BPAP04003 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
C4BPAP04003 RPPH1-201ENST00000516869 333 ntBASIC21.15■□□□□ 0.98
C4BPAP04003 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C4BPAP04003 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.15■□□□□ 0.98
C4BPAP04003 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4BPAP04003 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4BPAP04003 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C4BPAP04003 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.15■□□□□ 0.98
C4BPAP04003 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C4BPAP04003 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C4BPAP04003 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
C4BPAP04003 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
C4BPAP04003 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.14■□□□□ 0.98
C4BPAP04003 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
C4BPAP04003 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
C4BPAP04003 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
C4BPAP04003 AC239809.2-201ENST00000415381 517 ntBASIC21.14■□□□□ 0.97
C4BPAP04003 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
C4BPAP04003 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
C4BPAP04003 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.14■□□□□ 0.97
C4BPAP04003 C1QBPP2-201ENST00000528754 825 ntBASIC21.14■□□□□ 0.97
C4BPAP04003 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.14■□□□□ 0.97
C4BPAP04003 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
C4BPAP04003 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.14■□□□□ 0.97
C4BPAP04003 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
C4BPAP04003 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
C4BPAP04003 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
C4BPAP04003 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
C4BPAP04003 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
C4BPAP04003 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.97
C4BPAP04003 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.14■□□□□ 0.97
C4BPAP04003 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C4BPAP04003 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
C4BPAP04003 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
C4BPAP04003 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C4BPAP04003 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.13■□□□□ 0.97
C4BPAP04003 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
C4BPAP04003 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
C4BPAP04003 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C4BPAP04003 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C4BPAP04003 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C4BPAP04003 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C4BPAP04003 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.13■□□□□ 0.97
C4BPAP04003 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
C4BPAP04003 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
C4BPAP04003 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C4BPAP04003 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C4BPAP04003 AC098590.1-201ENST00000468126 897 ntBASIC21.13■□□□□ 0.97
C4BPAP04003 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.13■□□□□ 0.97
C4BPAP04003 AL359736.2-201ENST00000621992 437 ntBASIC21.13■□□□□ 0.97
C4BPAP04003 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.13■□□□□ 0.97
C4BPAP04003 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.13■□□□□ 0.97
C4BPAP04003 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C4BPAP04003 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms