Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
APOEP02649 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.6■□□□□ 0.89
APOEP02649 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.6■□□□□ 0.89
APOEP02649 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.6■□□□□ 0.89
APOEP02649 RN7SL471P-201ENST00000580476 299 ntBASIC20.6■□□□□ 0.89
APOEP02649 MTDHP1-201ENST00000605323 784 ntBASIC20.6■□□□□ 0.89
APOEP02649 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
APOEP02649 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
APOEP02649 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
APOEP02649 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APOEP02649 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
APOEP02649 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.6■□□□□ 0.89
APOEP02649 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APOEP02649 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APOEP02649 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
APOEP02649 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APOEP02649 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.59■□□□□ 0.89
APOEP02649 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.59■□□□□ 0.89
APOEP02649 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.59■□□□□ 0.89
APOEP02649 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APOEP02649 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
APOEP02649 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APOEP02649 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APOEP02649 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.59■□□□□ 0.89
APOEP02649 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
APOEP02649 C1QBPP2-201ENST00000528754 825 ntBASIC20.59■□□□□ 0.89
APOEP02649 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.59■□□□□ 0.89
APOEP02649 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.59■□□□□ 0.89
APOEP02649 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.59■□□□□ 0.89
APOEP02649 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
APOEP02649 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
APOEP02649 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.59■□□□□ 0.89
APOEP02649 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
APOEP02649 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.58■□□□□ 0.89
APOEP02649 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
APOEP02649 PHGDH-210ENST00000641115 1638 ntBASIC20.58■□□□□ 0.89
APOEP02649 AC239809.2-201ENST00000415381 517 ntBASIC20.58■□□□□ 0.89
APOEP02649 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
APOEP02649 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.58■□□□□ 0.89
APOEP02649 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.58■□□□□ 0.89
APOEP02649 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
APOEP02649 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.58■□□□□ 0.89
APOEP02649 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.58■□□□□ 0.89
APOEP02649 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
APOEP02649 AC142381.4-202ENST00000563973 229 ntBASIC20.58■□□□□ 0.89
APOEP02649 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
APOEP02649 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.58■□□□□ 0.88
APOEP02649 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.58■□□□□ 0.88
APOEP02649 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
APOEP02649 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
APOEP02649 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.58■□□□□ 0.88
APOEP02649 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
APOEP02649 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
APOEP02649 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APOEP02649 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
APOEP02649 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
APOEP02649 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APOEP02649 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APOEP02649 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APOEP02649 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APOEP02649 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APOEP02649 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
APOEP02649 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APOEP02649 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APOEP02649 AC098590.1-201ENST00000468126 897 ntBASIC20.57■□□□□ 0.88
APOEP02649 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.57■□□□□ 0.88
APOEP02649 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.57■□□□□ 0.88
APOEP02649 AC138932.1-201ENST00000534164 6830 ntBASIC20.57■□□□□ 0.88
APOEP02649 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APOEP02649 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APOEP02649 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
APOEP02649 TCF3P1-201ENST00000423021 1937 ntBASIC20.57■□□□□ 0.88
APOEP02649 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
APOEP02649 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
APOEP02649 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APOEP02649 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
APOEP02649 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APOEP02649 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APOEP02649 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APOEP02649 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.56■□□□□ 0.88
APOEP02649 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.56■□□□□ 0.88
APOEP02649 GCSHP5-201ENST00000443090 522 ntBASIC20.56■□□□□ 0.88
APOEP02649 AL158047.1-201ENST00000445918 881 ntBASIC20.56■□□□□ 0.88
APOEP02649 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.56■□□□□ 0.88
APOEP02649 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.56■□□□□ 0.88
APOEP02649 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.56■□□□□ 0.88
APOEP02649 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APOEP02649 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.56■□□□□ 0.88
APOEP02649 FAM197Y4-202ENST00000622692 608 ntBASIC20.56■□□□□ 0.88
APOEP02649 AL023875.1-201ENST00000640777 796 ntBASIC20.56■□□□□ 0.88
APOEP02649 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.56■□□□□ 0.88
APOEP02649 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.56■□□□□ 0.88
APOEP02649 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
APOEP02649 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APOEP02649 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APOEP02649 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APOEP02649 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
APOEP02649 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
APOEP02649 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
APOEP02649 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms