Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLPTM1O96005 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.52■□□□□ 0.56
CLPTM1O96005 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLPTM1O96005 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLPTM1O96005 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLPTM1O96005 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLPTM1O96005 BX005040.4-201ENST00000637145 1518 ntBASIC18.52■□□□□ 0.56
CLPTM1O96005 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLPTM1O96005 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLPTM1O96005 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLPTM1O96005 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.52■□□□□ 0.55
CLPTM1O96005 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLPTM1O96005 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLPTM1O96005 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLPTM1O96005 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.51■□□□□ 0.55
CLPTM1O96005 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPTM1O96005 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLPTM1O96005 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPTM1O96005 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPTM1O96005 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CLPTM1O96005 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CLPTM1O96005 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPTM1O96005 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.51■□□□□ 0.55
CLPTM1O96005 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.51■□□□□ 0.55
CLPTM1O96005 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.51■□□□□ 0.55
CLPTM1O96005 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPTM1O96005 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.51■□□□□ 0.55
CLPTM1O96005 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CLPTM1O96005 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLPTM1O96005 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLPTM1O96005 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CLPTM1O96005 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPTM1O96005 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.5■□□□□ 0.55
CLPTM1O96005 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.5■□□□□ 0.55
CLPTM1O96005 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPTM1O96005 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.5■□□□□ 0.55
CLPTM1O96005 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPTM1O96005 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.5■□□□□ 0.55
CLPTM1O96005 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.5■□□□□ 0.55
CLPTM1O96005 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPTM1O96005 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPTM1O96005 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPTM1O96005 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
CLPTM1O96005 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPTM1O96005 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPTM1O96005 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPTM1O96005 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.5■□□□□ 0.55
CLPTM1O96005 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.5■□□□□ 0.55
CLPTM1O96005 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.5■□□□□ 0.55
CLPTM1O96005 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLPTM1O96005 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.5■□□□□ 0.55
CLPTM1O96005 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPTM1O96005 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPTM1O96005 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPTM1O96005 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.5■□□□□ 0.55
CLPTM1O96005 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
CLPTM1O96005 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPTM1O96005 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.5■□□□□ 0.55
CLPTM1O96005 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CLPTM1O96005 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CLPTM1O96005 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.49■□□□□ 0.55
CLPTM1O96005 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.49■□□□□ 0.55
CLPTM1O96005 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CLPTM1O96005 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.49■□□□□ 0.55
CLPTM1O96005 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CLPTM1O96005 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLPTM1O96005 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.49■□□□□ 0.55
CLPTM1O96005 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.49■□□□□ 0.55
CLPTM1O96005 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.49■□□□□ 0.55
CLPTM1O96005 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CLPTM1O96005 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CLPTM1O96005 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLPTM1O96005 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CLPTM1O96005 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.49■□□□□ 0.55
CLPTM1O96005 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPTM1O96005 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLPTM1O96005 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLPTM1O96005 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLPTM1O96005 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLPTM1O96005 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLPTM1O96005 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLPTM1O96005 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLPTM1O96005 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.48■□□□□ 0.55
CLPTM1O96005 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPTM1O96005 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLPTM1O96005 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CLPTM1O96005 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms