Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ABCA1O95477 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.47■□□□□ 0.23
ABCA1O95477 AK4P3-201ENST00000418260 669 ntBASIC16.47■□□□□ 0.23
ABCA1O95477 AC026271.3-201ENST00000571884 352 ntBASIC16.47■□□□□ 0.23
ABCA1O95477 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.47■□□□□ 0.23
ABCA1O95477 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.47■□□□□ 0.23
ABCA1O95477 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.47■□□□□ 0.23
ABCA1O95477 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ABCA1O95477 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
ABCA1O95477 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ABCA1O95477 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
ABCA1O95477 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ABCA1O95477 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ABCA1O95477 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ABCA1O95477 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ABCA1O95477 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ABCA1O95477 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.46■□□□□ 0.23
ABCA1O95477 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ABCA1O95477 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.46■□□□□ 0.23
ABCA1O95477 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.46■□□□□ 0.23
ABCA1O95477 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.46■□□□□ 0.23
ABCA1O95477 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.46■□□□□ 0.23
ABCA1O95477 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.46■□□□□ 0.23
ABCA1O95477 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.46■□□□□ 0.23
ABCA1O95477 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ABCA1O95477 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.46■□□□□ 0.23
ABCA1O95477 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ABCA1O95477 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ABCA1O95477 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.45■□□□□ 0.22
ABCA1O95477 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.45■□□□□ 0.22
ABCA1O95477 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.45■□□□□ 0.22
ABCA1O95477 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.45■□□□□ 0.22
ABCA1O95477 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.45■□□□□ 0.22
ABCA1O95477 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
ABCA1O95477 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.45■□□□□ 0.22
ABCA1O95477 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.45■□□□□ 0.22
ABCA1O95477 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.45■□□□□ 0.22
ABCA1O95477 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.45■□□□□ 0.22
ABCA1O95477 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ABCA1O95477 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ABCA1O95477 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.45■□□□□ 0.22
ABCA1O95477 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.44■□□□□ 0.22
ABCA1O95477 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.44■□□□□ 0.22
ABCA1O95477 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ABCA1O95477 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
ABCA1O95477 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.44■□□□□ 0.22
ABCA1O95477 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.44■□□□□ 0.22
ABCA1O95477 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 AL137013.1-201ENST00000432946 1228 ntBASIC16.44■□□□□ 0.22
ABCA1O95477 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.44■□□□□ 0.22
ABCA1O95477 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.44■□□□□ 0.22
ABCA1O95477 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
ABCA1O95477 CR392000.1-201ENST00000624770 1228 ntBASIC16.44■□□□□ 0.22
ABCA1O95477 AL031985.4-201ENST00000642138 673 ntBASIC16.44■□□□□ 0.22
ABCA1O95477 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ABCA1O95477 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
ABCA1O95477 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ABCA1O95477 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
ABCA1O95477 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ABCA1O95477 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ABCA1O95477 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ABCA1O95477 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ABCA1O95477 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.43■□□□□ 0.22
ABCA1O95477 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ABCA1O95477 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ABCA1O95477 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ABCA1O95477 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ABCA1O95477 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.43■□□□□ 0.22
ABCA1O95477 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms