Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
RAPGEF3O95398 AC242852.2-201ENST00000615738 1807 ntBASIC29.7■■■□□ 2.34
RAPGEF3O95398 LINC01311-201ENST00000565162 1445 ntBASIC29.7■■■□□ 2.34
RAPGEF3O95398 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
RAPGEF3O95398 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
RAPGEF3O95398 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RAPGEF3O95398 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC29.69■■■□□ 2.34
RAPGEF3O95398 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
RAPGEF3O95398 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC29.69■■■□□ 2.34
RAPGEF3O95398 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RAPGEF3O95398 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RAPGEF3O95398 PRELID1P1-202ENST00000567272 903 ntBASIC29.69■■■□□ 2.34
RAPGEF3O95398 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC29.69■■■□□ 2.34
RAPGEF3O95398 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC29.69■■■□□ 2.34
RAPGEF3O95398 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
RAPGEF3O95398 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC29.69■■■□□ 2.34
RAPGEF3O95398 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RAPGEF3O95398 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC29.68■■■□□ 2.34
RAPGEF3O95398 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC29.67■■■□□ 2.34
RAPGEF3O95398 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
RAPGEF3O95398 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC29.67■■■□□ 2.34
RAPGEF3O95398 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC29.67■■■□□ 2.34
RAPGEF3O95398 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RAPGEF3O95398 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
RAPGEF3O95398 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RAPGEF3O95398 AP000593.1-201ENST00000393668 712 ntBASIC29.67■■■□□ 2.34
RAPGEF3O95398 DERL1-203ENST00000419562 918 ntTSL 2 BASIC29.67■■■□□ 2.34
RAPGEF3O95398 CKBP1-201ENST00000565489 1086 ntBASIC29.67■■■□□ 2.34
RAPGEF3O95398 NT5C-210ENST00000582160 860 ntTSL 2 BASIC29.67■■■□□ 2.34
RAPGEF3O95398 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC29.67■■■□□ 2.34
RAPGEF3O95398 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
RAPGEF3O95398 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC29.67■■■□□ 2.34
RAPGEF3O95398 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
RAPGEF3O95398 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC29.67■■■□□ 2.34
RAPGEF3O95398 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RAPGEF3O95398 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RAPGEF3O95398 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
RAPGEF3O95398 AC004870.1-201ENST00000315132 882 ntBASIC29.66■■■□□ 2.34
RAPGEF3O95398 STARP1-201ENST00000397973 869 ntBASIC29.66■■■□□ 2.34
RAPGEF3O95398 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
RAPGEF3O95398 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RAPGEF3O95398 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC29.66■■■□□ 2.34
RAPGEF3O95398 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
RAPGEF3O95398 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC29.66■■■□□ 2.34
RAPGEF3O95398 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC29.65■■■□□ 2.34
RAPGEF3O95398 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC29.65■■■□□ 2.34
RAPGEF3O95398 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RAPGEF3O95398 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RAPGEF3O95398 TUB-203ENST00000534099 1759 ntTSL 2 BASIC29.65■■■□□ 2.34
RAPGEF3O95398 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC29.65■■■□□ 2.34
RAPGEF3O95398 SPDYE15P-201ENST00000424157 909 ntBASIC29.65■■■□□ 2.34
RAPGEF3O95398 AC009078.2-202ENST00000463353 338 ntBASIC29.65■■■□□ 2.34
RAPGEF3O95398 CA15P1-201ENST00000481698 905 ntBASIC29.65■■■□□ 2.34
RAPGEF3O95398 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC29.65■■■□□ 2.34
RAPGEF3O95398 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
RAPGEF3O95398 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
RAPGEF3O95398 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC29.65■■■□□ 2.34
RAPGEF3O95398 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
RAPGEF3O95398 CASK-201ENST00000378154 2494 ntTSL 5 BASIC29.65■■■□□ 2.34
RAPGEF3O95398 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC29.64■■■□□ 2.34
RAPGEF3O95398 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RAPGEF3O95398 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
RAPGEF3O95398 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RAPGEF3O95398 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
RAPGEF3O95398 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
RAPGEF3O95398 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RAPGEF3O95398 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RAPGEF3O95398 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
RAPGEF3O95398 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC29.64■■■□□ 2.34
RAPGEF3O95398 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
RAPGEF3O95398 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
RAPGEF3O95398 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RAPGEF3O95398 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC29.64■■■□□ 2.34
RAPGEF3O95398 GCSHP2-201ENST00000560971 527 ntBASIC29.64■■■□□ 2.34
RAPGEF3O95398 AC111152.3-201ENST00000569699 673 ntBASIC29.64■■■□□ 2.34
RAPGEF3O95398 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC29.64■■■□□ 2.34
RAPGEF3O95398 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC29.64■■■□□ 2.33
RAPGEF3O95398 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
RAPGEF3O95398 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
RAPGEF3O95398 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC29.63■■■□□ 2.33
RAPGEF3O95398 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC29.63■■■□□ 2.33
RAPGEF3O95398 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
RAPGEF3O95398 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RAPGEF3O95398 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RAPGEF3O95398 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
RAPGEF3O95398 AC121338.2-201ENST00000622535 1744 ntBASIC29.62■■■□□ 2.33
RAPGEF3O95398 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RAPGEF3O95398 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
RAPGEF3O95398 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RAPGEF3O95398 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RAPGEF3O95398 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC29.62■■■□□ 2.33
RAPGEF3O95398 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC29.62■■■□□ 2.33
RAPGEF3O95398 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
RAPGEF3O95398 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC29.62■■■□□ 2.33
RAPGEF3O95398 AC092329.2-201ENST00000598402 547 ntBASIC29.62■■■□□ 2.33
RAPGEF3O95398 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC29.62■■■□□ 2.33
RAPGEF3O95398 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RAPGEF3O95398 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC29.62■■■□□ 2.33
RAPGEF3O95398 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RAPGEF3O95398 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC29.61■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms