Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAPBO95292 AIRN-201ENST00000601203 4374 ntBASIC19.76■□□□□ 0.75
VAPBO95292 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAPBO95292 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
VAPBO95292 AC018553.1-201ENST00000616682 1458 ntBASIC19.76■□□□□ 0.75
VAPBO95292 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.76■□□□□ 0.75
VAPBO95292 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VAPBO95292 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAPBO95292 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.76■□□□□ 0.75
VAPBO95292 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VAPBO95292 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.76■□□□□ 0.75
VAPBO95292 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.76■□□□□ 0.75
VAPBO95292 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAPBO95292 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
VAPBO95292 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
VAPBO95292 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
VAPBO95292 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.75■□□□□ 0.75
VAPBO95292 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.75■□□□□ 0.75
VAPBO95292 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.75■□□□□ 0.75
VAPBO95292 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.75■□□□□ 0.75
VAPBO95292 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
VAPBO95292 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPBO95292 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.74■□□□□ 0.75
VAPBO95292 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAPBO95292 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAPBO95292 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VAPBO95292 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
VAPBO95292 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAPBO95292 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.74■□□□□ 0.75
VAPBO95292 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAPBO95292 AC097658.1-201ENST00000475555 843 ntBASIC19.74■□□□□ 0.75
VAPBO95292 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VAPBO95292 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.74■□□□□ 0.75
VAPBO95292 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.74■□□□□ 0.75
VAPBO95292 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VAPBO95292 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.74■□□□□ 0.75
VAPBO95292 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VAPBO95292 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
VAPBO95292 AL020996.1-203ENST00000536896 2307 ntBASIC19.74■□□□□ 0.75
VAPBO95292 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.74■□□□□ 0.75
VAPBO95292 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
VAPBO95292 AC116351.2-201ENST00000606540 1585 ntBASIC19.74■□□□□ 0.75
VAPBO95292 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPBO95292 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.73■□□□□ 0.75
VAPBO95292 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VAPBO95292 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VAPBO95292 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.73■□□□□ 0.75
VAPBO95292 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPBO95292 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.73■□□□□ 0.75
VAPBO95292 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPBO95292 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPBO95292 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
VAPBO95292 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.73■□□□□ 0.75
VAPBO95292 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPBO95292 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPBO95292 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.73■□□□□ 0.75
VAPBO95292 AC073210.2-201ENST00000430369 194 ntBASIC19.73■□□□□ 0.75
VAPBO95292 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.73■□□□□ 0.75
VAPBO95292 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.73■□□□□ 0.75
VAPBO95292 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.73■□□□□ 0.75
VAPBO95292 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.73■□□□□ 0.75
VAPBO95292 AC098934.4-201ENST00000564127 592 ntBASIC19.73■□□□□ 0.75
VAPBO95292 AL138781.1-201ENST00000566567 1274 ntBASIC19.73■□□□□ 0.75
VAPBO95292 AL109923.1-201ENST00000618799 583 ntBASIC19.73■□□□□ 0.75
VAPBO95292 AC006557.6-201ENST00000623071 864 ntBASIC19.73■□□□□ 0.75
VAPBO95292 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.73■□□□□ 0.75
VAPBO95292 MYC-209ENST00000641252 345 ntBASIC19.73■□□□□ 0.75
VAPBO95292 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPBO95292 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPBO95292 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPBO95292 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.73■□□□□ 0.75
VAPBO95292 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.73■□□□□ 0.75
VAPBO95292 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
VAPBO95292 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VAPBO95292 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VAPBO95292 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
VAPBO95292 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VAPBO95292 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VAPBO95292 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VAPBO95292 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAPBO95292 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAPBO95292 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms