Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT33AO76009 AL390719.1-204ENST00000412397 1219 ntBASIC17.82■□□□□ 0.44
KRT33AO76009 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT33AO76009 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.82■□□□□ 0.44
KRT33AO76009 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
KRT33AO76009 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT33AO76009 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT33AO76009 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT33AO76009 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT33AO76009 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
KRT33AO76009 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT33AO76009 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT33AO76009 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT33AO76009 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT33AO76009 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
KRT33AO76009 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT33AO76009 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
KRT33AO76009 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
KRT33AO76009 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT33AO76009 BX323043.1-201ENST00000641006 1765 ntBASIC17.81■□□□□ 0.44
KRT33AO76009 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT33AO76009 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT33AO76009 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT33AO76009 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT33AO76009 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT33AO76009 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT33AO76009 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT33AO76009 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT33AO76009 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT33AO76009 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT33AO76009 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT33AO76009 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT33AO76009 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT33AO76009 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
KRT33AO76009 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KRT33AO76009 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT33AO76009 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT33AO76009 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT33AO76009 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT33AO76009 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT33AO76009 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT33AO76009 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT33AO76009 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT33AO76009 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT33AO76009 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT33AO76009 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KRT33AO76009 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT33AO76009 AC099778.1-201ENST00000568593 1911 ntBASIC17.8■□□□□ 0.44
KRT33AO76009 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
KRT33AO76009 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT33AO76009 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KRT33AO76009 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
KRT33AO76009 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT33AO76009 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT33AO76009 HLA-G-202ENST00000376815 851 ntBASIC17.8■□□□□ 0.44
KRT33AO76009 HLA-G-203ENST00000376818 1127 ntBASIC17.8■□□□□ 0.44
KRT33AO76009 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.8■□□□□ 0.44
KRT33AO76009 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT33AO76009 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.8■□□□□ 0.44
KRT33AO76009 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT33AO76009 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT33AO76009 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT33AO76009 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT33AO76009 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
KRT33AO76009 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KRT33AO76009 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT33AO76009 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.8■□□□□ 0.44
KRT33AO76009 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
KRT33AO76009 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT33AO76009 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT33AO76009 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT33AO76009 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT33AO76009 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT33AO76009 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
KRT33AO76009 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT33AO76009 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT33AO76009 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
KRT33AO76009 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT33AO76009 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.79■□□□□ 0.44
KRT33AO76009 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.79■□□□□ 0.44
KRT33AO76009 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.79■□□□□ 0.44
KRT33AO76009 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT33AO76009 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT33AO76009 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT33AO76009 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT33AO76009 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT33AO76009 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT33AO76009 AC092368.3-202ENST00000574180 1591 ntBASIC17.79■□□□□ 0.44
KRT33AO76009 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT33AO76009 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT33AO76009 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
KRT33AO76009 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT33AO76009 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT33AO76009 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT33AO76009 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT33AO76009 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT33AO76009 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT33AO76009 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT33AO76009 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT33AO76009 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms