Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFPL1O75677 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RFPL1O75677 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFPL1O75677 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.73■□□□□ 0.75
RFPL1O75677 RNA5SP413-201ENST00000516373 109 ntBASIC19.73■□□□□ 0.75
RFPL1O75677 AC100791.3-201ENST00000617619 330 ntBASIC19.73■□□□□ 0.75
RFPL1O75677 AC008694.1-202ENST00000636953 945 ntBASIC19.73■□□□□ 0.75
RFPL1O75677 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.73■□□□□ 0.75
RFPL1O75677 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RFPL1O75677 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFPL1O75677 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFPL1O75677 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
RFPL1O75677 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RFPL1O75677 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RFPL1O75677 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFPL1O75677 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
RFPL1O75677 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.73■□□□□ 0.75
RFPL1O75677 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFPL1O75677 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFPL1O75677 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.72■□□□□ 0.75
RFPL1O75677 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFPL1O75677 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFPL1O75677 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.72■□□□□ 0.75
RFPL1O75677 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.72■□□□□ 0.75
RFPL1O75677 MCRIP2P1-201ENST00000394346 511 ntBASIC19.72■□□□□ 0.75
RFPL1O75677 KRT18P29-201ENST00000397031 1267 ntBASIC19.72■□□□□ 0.75
RFPL1O75677 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.72■□□□□ 0.75
RFPL1O75677 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFPL1O75677 AC093827.2-201ENST00000512654 315 ntBASIC19.72■□□□□ 0.75
RFPL1O75677 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RFPL1O75677 AC068338.2-201ENST00000563278 1430 ntBASIC19.72■□□□□ 0.75
RFPL1O75677 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.72■□□□□ 0.75
RFPL1O75677 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFPL1O75677 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RFPL1O75677 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFPL1O75677 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFPL1O75677 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RFPL1O75677 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.72■□□□□ 0.75
RFPL1O75677 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RFPL1O75677 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.71■□□□□ 0.75
RFPL1O75677 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFPL1O75677 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
RFPL1O75677 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.71■□□□□ 0.75
RFPL1O75677 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.71■□□□□ 0.75
RFPL1O75677 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
RFPL1O75677 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFPL1O75677 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFPL1O75677 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.71■□□□□ 0.75
RFPL1O75677 MIPEPP3-201ENST00000412105 444 ntBASIC19.71■□□□□ 0.75
RFPL1O75677 RARRES2P4-201ENST00000514074 484 ntBASIC19.71■□□□□ 0.75
RFPL1O75677 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.71■□□□□ 0.75
RFPL1O75677 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.71■□□□□ 0.75
RFPL1O75677 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.71■□□□□ 0.75
RFPL1O75677 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.71■□□□□ 0.75
RFPL1O75677 ITM2C-210ENST00000620962 501 ntBASIC19.71■□□□□ 0.75
RFPL1O75677 OR10C1-204ENST00000622521 1039 ntBASIC19.71■□□□□ 0.75
RFPL1O75677 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFPL1O75677 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.71■□□□□ 0.75
RFPL1O75677 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFPL1O75677 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFPL1O75677 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.71■□□□□ 0.75
RFPL1O75677 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFPL1O75677 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFPL1O75677 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RFPL1O75677 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.7■□□□□ 0.74
RFPL1O75677 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RFPL1O75677 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.7■□□□□ 0.74
RFPL1O75677 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.7■□□□□ 0.74
RFPL1O75677 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
RFPL1O75677 AC008687.6-201ENST00000596318 630 ntBASIC19.7■□□□□ 0.74
RFPL1O75677 AC069236.1-201ENST00000604339 616 ntBASIC19.7■□□□□ 0.74
RFPL1O75677 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RFPL1O75677 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.7■□□□□ 0.74
RFPL1O75677 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.7■□□□□ 0.74
RFPL1O75677 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.7■□□□□ 0.74
RFPL1O75677 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.7■□□□□ 0.74
RFPL1O75677 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RFPL1O75677 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RFPL1O75677 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
RFPL1O75677 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFPL1O75677 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.7■□□□□ 0.74
RFPL1O75677 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFPL1O75677 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFPL1O75677 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFPL1O75677 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFPL1O75677 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFPL1O75677 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms