Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HCN1O60741 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.35■□□□□ 0.53
HCN1O60741 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 GCSHP5-201ENST00000443090 522 ntBASIC18.35■□□□□ 0.53
HCN1O60741 AC098590.1-201ENST00000468126 897 ntBASIC18.35■□□□□ 0.53
HCN1O60741 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.35■□□□□ 0.53
HCN1O60741 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 SOX15-203ENST00000570788 1093 ntBASIC18.35■□□□□ 0.53
HCN1O60741 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HCN1O60741 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.35■□□□□ 0.53
HCN1O60741 AC018445.3-201ENST00000624177 1945 ntBASIC18.35■□□□□ 0.53
HCN1O60741 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.35■□□□□ 0.53
HCN1O60741 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.34■□□□□ 0.53
HCN1O60741 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.34■□□□□ 0.53
HCN1O60741 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.34■□□□□ 0.53
HCN1O60741 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
HCN1O60741 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.34■□□□□ 0.53
HCN1O60741 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.34■□□□□ 0.53
HCN1O60741 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.34■□□□□ 0.53
HCN1O60741 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.34■□□□□ 0.53
HCN1O60741 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 AP006294.2-201ENST00000641667 209 ntBASIC18.34■□□□□ 0.53
HCN1O60741 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
HCN1O60741 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HCN1O60741 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCN1O60741 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.34■□□□□ 0.53
HCN1O60741 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
HCN1O60741 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCN1O60741 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCN1O60741 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCN1O60741 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCN1O60741 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCN1O60741 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCN1O60741 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCN1O60741 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.33■□□□□ 0.53
HCN1O60741 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HCN1O60741 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.33■□□□□ 0.52
HCN1O60741 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HCN1O60741 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.33■□□□□ 0.52
HCN1O60741 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.33■□□□□ 0.52
HCN1O60741 AC142381.4-202ENST00000563973 229 ntBASIC18.33■□□□□ 0.52
HCN1O60741 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.33■□□□□ 0.52
HCN1O60741 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCN1O60741 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCN1O60741 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HCN1O60741 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCN1O60741 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HCN1O60741 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCN1O60741 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCN1O60741 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCN1O60741 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.33■□□□□ 0.52
HCN1O60741 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HCN1O60741 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCN1O60741 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCN1O60741 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.32■□□□□ 0.52
HCN1O60741 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.32■□□□□ 0.52
HCN1O60741 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCN1O60741 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCN1O60741 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCN1O60741 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCN1O60741 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCN1O60741 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.32■□□□□ 0.52
HCN1O60741 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCN1O60741 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.32■□□□□ 0.52
HCN1O60741 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.32■□□□□ 0.52
HCN1O60741 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCN1O60741 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HCN1O60741 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCN1O60741 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCN1O60741 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCN1O60741 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HCN1O60741 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.31■□□□□ 0.52
HCN1O60741 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms