Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RIPK2O43353 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RIPK2O43353 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RIPK2O43353 KRT18P14-201ENST00000534205 1250 ntBASIC19.98■□□□□ 0.79
RIPK2O43353 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 MYCNOS-205ENST00000641950 531 ntBASIC19.98■□□□□ 0.79
RIPK2O43353 AL049812.1-201ENST00000432563 2267 ntBASIC19.98■□□□□ 0.79
RIPK2O43353 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
RIPK2O43353 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RIPK2O43353 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.98■□□□□ 0.79
RIPK2O43353 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.98■□□□□ 0.79
RIPK2O43353 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.97■□□□□ 0.79
RIPK2O43353 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RIPK2O43353 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RIPK2O43353 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.97■□□□□ 0.79
RIPK2O43353 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.97■□□□□ 0.79
RIPK2O43353 YBX1P1-201ENST00000445822 960 ntBASIC19.97■□□□□ 0.79
RIPK2O43353 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.97■□□□□ 0.79
RIPK2O43353 AL139246.5-201ENST00000606645 996 ntBASIC19.97■□□□□ 0.79
RIPK2O43353 AC016405.3-201ENST00000607710 860 ntBASIC19.97■□□□□ 0.79
RIPK2O43353 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.97■□□□□ 0.79
RIPK2O43353 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RIPK2O43353 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RIPK2O43353 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RIPK2O43353 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.97■□□□□ 0.79
RIPK2O43353 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RIPK2O43353 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RIPK2O43353 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK2O43353 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.96■□□□□ 0.79
RIPK2O43353 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RIPK2O43353 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
RIPK2O43353 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.96■□□□□ 0.79
RIPK2O43353 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RIPK2O43353 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.96■□□□□ 0.79
RIPK2O43353 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK2O43353 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.96■□□□□ 0.79
RIPK2O43353 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK2O43353 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RIPK2O43353 KRT19P1-201ENST00000405746 1186 ntBASIC19.96■□□□□ 0.79
RIPK2O43353 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.96■□□□□ 0.79
RIPK2O43353 TERF1P5-201ENST00000477545 1207 ntBASIC19.96■□□□□ 0.79
RIPK2O43353 KRT18P61-201ENST00000585825 1298 ntBASIC19.96■□□□□ 0.79
RIPK2O43353 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.96■□□□□ 0.79
RIPK2O43353 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.96■□□□□ 0.79
RIPK2O43353 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.96■□□□□ 0.79
RIPK2O43353 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RIPK2O43353 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK2O43353 AC104581.1-202ENST00000635932 2618 ntBASIC19.96■□□□□ 0.79
RIPK2O43353 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK2O43353 AC006333.2-201ENST00000607957 2099 ntBASIC19.96■□□□□ 0.79
RIPK2O43353 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK2O43353 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK2O43353 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK2O43353 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK2O43353 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.96■□□□□ 0.79
RIPK2O43353 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.96■□□□□ 0.79
RIPK2O43353 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIPK2O43353 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RIPK2O43353 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK2O43353 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK2O43353 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RIPK2O43353 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK2O43353 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
RIPK2O43353 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK2O43353 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK2O43353 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RIPK2O43353 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK2O43353 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK2O43353 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.95■□□□□ 0.78
RIPK2O43353 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.95■□□□□ 0.78
RIPK2O43353 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK2O43353 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.95■□□□□ 0.78
RIPK2O43353 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RIPK2O43353 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms