Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX4O43316 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX4O43316 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PAX4O43316 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.04□□□□□ -0.16
PAX4O43316 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PAX4O43316 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX4O43316 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.04□□□□□ -0.16
PAX4O43316 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX4O43316 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX4O43316 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX4O43316 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX4O43316 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX4O43316 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PAX4O43316 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.04□□□□□ -0.16
PAX4O43316 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX4O43316 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX4O43316 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX4O43316 PTBP1P-201ENST00000554374 1601 ntBASIC14.04□□□□□ -0.16
PAX4O43316 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PAX4O43316 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PAX4O43316 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
PAX4O43316 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX4O43316 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX4O43316 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.03□□□□□ -0.16
PAX4O43316 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX4O43316 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.03□□□□□ -0.16
PAX4O43316 MYC-209ENST00000641252 345 ntBASIC14.03□□□□□ -0.16
PAX4O43316 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PAX4O43316 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX4O43316 AC092368.3-202ENST00000574180 1591 ntBASIC14.03□□□□□ -0.16
PAX4O43316 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.03□□□□□ -0.16
PAX4O43316 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 AC099778.1-201ENST00000568593 1911 ntBASIC14.03□□□□□ -0.16
PAX4O43316 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX4O43316 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX4O43316 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 RNF165-205ENST00000588679 2904 ntBASIC14.02□□□□□ -0.16
PAX4O43316 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.02□□□□□ -0.16
PAX4O43316 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.02□□□□□ -0.16
PAX4O43316 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.02□□□□□ -0.16
PAX4O43316 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.02□□□□□ -0.16
PAX4O43316 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PAX4O43316 BX119927.1-201ENST00000636596 1552 ntBASIC14.02□□□□□ -0.16
PAX4O43316 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PAX4O43316 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PAX4O43316 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX4O43316 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PAX4O43316 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.02□□□□□ -0.17
PAX4O43316 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX4O43316 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.02□□□□□ -0.17
PAX4O43316 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PAX4O43316 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.02□□□□□ -0.17
PAX4O43316 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX4O43316 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.02□□□□□ -0.17
PAX4O43316 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.02□□□□□ -0.17
PAX4O43316 HLA-B-256ENST00000639848 1089 ntBASIC14.02□□□□□ -0.17
PAX4O43316 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
PAX4O43316 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX4O43316 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PAX4O43316 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
PAX4O43316 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
PAX4O43316 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PAX4O43316 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX4O43316 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX4O43316 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
PAX4O43316 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX4O43316 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX4O43316 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PAX4O43316 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.01□□□□□ -0.17
PAX4O43316 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX4O43316 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX4O43316 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.01□□□□□ -0.17
PAX4O43316 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.01□□□□□ -0.17
PAX4O43316 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PAX4O43316 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms