Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.54■■□□□ 1.36
FOXN1O15353 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FOXN1O15353 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
FOXN1O15353 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
FOXN1O15353 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FOXN1O15353 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
FOXN1O15353 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.53■■□□□ 1.36
FOXN1O15353 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.53■■□□□ 1.36
FOXN1O15353 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
FOXN1O15353 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXN1O15353 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXN1O15353 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.53■■□□□ 1.36
FOXN1O15353 AC092647.4-201ENST00000457211 535 ntBASIC23.53■■□□□ 1.36
FOXN1O15353 FAM87A-204ENST00000613235 858 ntBASIC23.53■■□□□ 1.36
FOXN1O15353 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
FOXN1O15353 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXN1O15353 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
FOXN1O15353 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXN1O15353 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.53■■□□□ 1.36
FOXN1O15353 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
FOXN1O15353 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.52■■□□□ 1.36
FOXN1O15353 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.52■■□□□ 1.36
FOXN1O15353 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
FOXN1O15353 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
FOXN1O15353 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
FOXN1O15353 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.52■■□□□ 1.36
FOXN1O15353 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.52■■□□□ 1.36
FOXN1O15353 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.52■■□□□ 1.36
FOXN1O15353 TSPY5P-201ENST00000426936 936 ntBASIC23.52■■□□□ 1.36
FOXN1O15353 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
FOXN1O15353 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
FOXN1O15353 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.52■■□□□ 1.36
FOXN1O15353 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.52■■□□□ 1.36
FOXN1O15353 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
FOXN1O15353 SLC25A24-204ENST00000569674 2357 ntBASIC23.52■■□□□ 1.36
FOXN1O15353 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
FOXN1O15353 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
FOXN1O15353 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.52■■□□□ 1.36
FOXN1O15353 LINC01006-201ENST00000333319 2292 ntBASIC23.52■■□□□ 1.36
FOXN1O15353 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXN1O15353 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.51■■□□□ 1.35
FOXN1O15353 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
FOXN1O15353 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
FOXN1O15353 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
FOXN1O15353 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
FOXN1O15353 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXN1O15353 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
FOXN1O15353 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
FOXN1O15353 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.51■■□□□ 1.35
FOXN1O15353 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXN1O15353 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXN1O15353 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.51■■□□□ 1.35
FOXN1O15353 INGX-201ENST00000359239 846 ntBASIC23.51■■□□□ 1.35
FOXN1O15353 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXN1O15353 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXN1O15353 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.51■■□□□ 1.35
FOXN1O15353 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.51■■□□□ 1.35
FOXN1O15353 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.51■■□□□ 1.35
FOXN1O15353 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.51■■□□□ 1.35
FOXN1O15353 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
FOXN1O15353 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
FOXN1O15353 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXN1O15353 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
FOXN1O15353 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXN1O15353 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
FOXN1O15353 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.51■■□□□ 1.35
FOXN1O15353 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXN1O15353 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXN1O15353 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.5■■□□□ 1.35
FOXN1O15353 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
FOXN1O15353 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXN1O15353 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.5■■□□□ 1.35
FOXN1O15353 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
FOXN1O15353 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.5■■□□□ 1.35
FOXN1O15353 YBX1P2-201ENST00000489612 999 ntBASIC23.5■■□□□ 1.35
FOXN1O15353 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.5■■□□□ 1.35
FOXN1O15353 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC23.5■■□□□ 1.35
FOXN1O15353 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
FOXN1O15353 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXN1O15353 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
FOXN1O15353 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
FOXN1O15353 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
FOXN1O15353 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXN1O15353 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
FOXN1O15353 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXN1O15353 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXN1O15353 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.5■■□□□ 1.35
FOXN1O15353 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
FOXN1O15353 AC092667.1-201ENST00000434301 2586 ntBASIC23.49■■□□□ 1.35
FOXN1O15353 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXN1O15353 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXN1O15353 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXN1O15353 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.49■■□□□ 1.35
FOXN1O15353 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.49■■□□□ 1.35
FOXN1O15353 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXN1O15353 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
FOXN1O15353 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXN1O15353 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
FOXN1O15353 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.49■■□□□ 1.35
FOXN1O15353 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms