Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ABCD4O14678 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.38■□□□□ 0.37
ABCD4O14678 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ABCD4O14678 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ABCD4O14678 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.38■□□□□ 0.37
ABCD4O14678 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ABCD4O14678 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ABCD4O14678 AC008550.1-201ENST00000511500 884 ntBASIC17.38■□□□□ 0.37
ABCD4O14678 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.38■□□□□ 0.37
ABCD4O14678 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ABCD4O14678 MTDHP1-201ENST00000605323 784 ntBASIC17.38■□□□□ 0.37
ABCD4O14678 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
ABCD4O14678 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ABCD4O14678 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.38■□□□□ 0.37
ABCD4O14678 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ABCD4O14678 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ABCD4O14678 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ABCD4O14678 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ABCD4O14678 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.38■□□□□ 0.37
ABCD4O14678 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ABCD4O14678 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ABCD4O14678 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.37■□□□□ 0.37
ABCD4O14678 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ABCD4O14678 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ABCD4O14678 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
ABCD4O14678 AC006128.1-201ENST00000624704 1661 ntBASIC17.37■□□□□ 0.37
ABCD4O14678 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.37■□□□□ 0.37
ABCD4O14678 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.37■□□□□ 0.37
ABCD4O14678 AC239809.2-201ENST00000415381 517 ntBASIC17.37■□□□□ 0.37
ABCD4O14678 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.37■□□□□ 0.37
ABCD4O14678 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.37■□□□□ 0.37
ABCD4O14678 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.37■□□□□ 0.37
ABCD4O14678 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 AL023875.1-201ENST00000640777 796 ntBASIC17.37■□□□□ 0.37
ABCD4O14678 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.37■□□□□ 0.37
ABCD4O14678 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
ABCD4O14678 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
ABCD4O14678 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
ABCD4O14678 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.37■□□□□ 0.37
ABCD4O14678 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCD4O14678 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCD4O14678 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.36■□□□□ 0.37
ABCD4O14678 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCD4O14678 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ABCD4O14678 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ABCD4O14678 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCD4O14678 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.36■□□□□ 0.37
ABCD4O14678 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ABCD4O14678 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.36■□□□□ 0.37
ABCD4O14678 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ABCD4O14678 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCD4O14678 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ABCD4O14678 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.36■□□□□ 0.37
ABCD4O14678 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.36■□□□□ 0.37
ABCD4O14678 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCD4O14678 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.36■□□□□ 0.37
ABCD4O14678 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCD4O14678 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCD4O14678 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.36■□□□□ 0.37
ABCD4O14678 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCD4O14678 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.35■□□□□ 0.37
ABCD4O14678 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCD4O14678 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCD4O14678 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCD4O14678 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ABCD4O14678 MIR718-201ENST00000390190 70 ntBASIC17.35■□□□□ 0.37
ABCD4O14678 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.35■□□□□ 0.37
ABCD4O14678 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.35■□□□□ 0.37
ABCD4O14678 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.35■□□□□ 0.37
ABCD4O14678 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
ABCD4O14678 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
ABCD4O14678 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ABCD4O14678 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.35■□□□□ 0.37
ABCD4O14678 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCD4O14678 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.35■□□□□ 0.37
ABCD4O14678 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ABCD4O14678 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCD4O14678 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ABCD4O14678 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCD4O14678 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCD4O14678 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.35■□□□□ 0.37
ABCD4O14678 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCD4O14678 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.35■□□□□ 0.37
ABCD4O14678 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.35■□□□□ 0.37
ABCD4O14678 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms