Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 AL031963.3-201ENST00000606441 850 ntBASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA2E9PIF3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 AL512408.1-201ENST00000569378 2000 ntBASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 KRT16P5-201ENST00000455284 522 ntBASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 MIR4785-201ENST00000585005 73 ntBASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 HTR7P1-201ENST00000538670 1336 ntBASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA2E9PIF3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 ECEL1P3-201ENST00000427961 737 ntBASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA2E9PIF3 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
NPIPA2E9PIF3 KRT8P17-201ENST00000453110 1448 ntBASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 AC211429.1-201ENST00000415277 523 ntBASIC17.9■□□□□ 0.46
NPIPA2E9PIF3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms