Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 KRT16P6-202ENST00000425692 1426 ntBASIC16.79■□□□□ 0.28
TMEM235A6NFC5 KRT8P17-201ENST00000453110 1448 ntBASIC16.79■□□□□ 0.28
TMEM235A6NFC5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 AP001271.2-201ENST00000624018 1556 ntBASIC16.78■□□□□ 0.28
TMEM235A6NFC5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 AC142381.2-201ENST00000566120 298 ntBASIC16.78■□□□□ 0.28
TMEM235A6NFC5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 CYP21A1P-202ENST00000354927 1481 ntBASIC16.78■□□□□ 0.28
TMEM235A6NFC5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM235A6NFC5 AC004854.2-201ENST00000608450 1441 ntBASIC16.78■□□□□ 0.28
TMEM235A6NFC5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TMEM235A6NFC5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM235A6NFC5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM235A6NFC5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.27
TMEM235A6NFC5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM235A6NFC5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM235A6NFC5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.77■□□□□ 0.27
TMEM235A6NFC5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM235A6NFC5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM235A6NFC5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM235A6NFC5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TMEM235A6NFC5 AC007613.1-201ENST00000572811 2597 ntBASIC16.77■□□□□ 0.27
TMEM235A6NFC5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM235A6NFC5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM235A6NFC5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 AC026471.1-201ENST00000564629 3026 ntBASIC16.76■□□□□ 0.27
TMEM235A6NFC5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM235A6NFC5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TMEM235A6NFC5 AL138781.2-201ENST00000617896 1843 ntBASIC16.75■□□□□ 0.27
TMEM235A6NFC5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM235A6NFC5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM235A6NFC5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM235A6NFC5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM235A6NFC5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms