Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 DPP3P2-201ENST00000416030 1696 ntBASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV4S1A1TA0A5B7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 UBE2SP1-201ENST00000450587 669 ntBASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AC125437.2-201ENST00000625180 2167 ntBASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 POM121L13P-201ENST00000422362 380 ntBASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 RPS2P4-201ENST00000476944 856 ntBASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AL359736.2-201ENST00000621992 437 ntBASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 TMEM179-206ENST00000616017 1645 ntBASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TCRBV4S1A1TA0A5B7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms