Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 GUSBP6-202ENST00000438529 1198 ntBASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 HLA-B-256ENST00000639848 1089 ntBASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRBV6-4A0A1B0GX49 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 RNF165-205ENST00000588679 2904 ntBASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 TFP1-202ENST00000475455 1573 ntBASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 AC116562.4-201ENST00000641316 2276 ntBASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRBV6-4A0A1B0GX49 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-4A0A1B0GX49 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRBV6-4A0A1B0GX49 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-4A0A1B0GX49 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-4A0A1B0GX49 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRBV6-4A0A1B0GX49 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-4A0A1B0GX49 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-4A0A1B0GX49 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRBV6-4A0A1B0GX49 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRBV6-4A0A1B0GX49 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-4A0A1B0GX49 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms