Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 MIR572-201ENST00000384983 95 ntBASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 AC135279.3-201ENST00000610945 1311 ntBASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 AC120498.10-201ENST00000621827 505 ntBASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV34A0A0B4J273 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV34A0A0B4J273 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV34A0A0B4J273 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms