Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 SOX15-203ENST00000570788 1093 ntBASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.39■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 AC005332.7-201ENST00000614046 2005 ntBASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 Z82202.1-201ENST00000623446 1880 ntBASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 AC120498.8-201ENST00000614275 531 ntBASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.37■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
IGKV1D-43A0A0B4J1Z2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms