Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 DPPA2P4-201ENST00000563717 878 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 MIR5708-201ENST00000579723 85 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC078795.3-201ENST00000602913 472 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 SNX29P2-204ENST00000603801 875 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC005858.3-201ENST00000624756 589 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 TMCC1P1-201ENST00000518897 1980 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 LINC01613-201ENST00000561476 2780 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 UGT2B24P-201ENST00000514441 1597 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC051619.3-201ENST00000560646 2426 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC006116.1-201ENST00000587908 2171 ntBASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
ZC3H4Q9UPT8 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AC105046.1-201ENST00000566457 4997 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 ATP8A2P3-201ENST00000426792 1536 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AC016716.1-201ENST00000265882 708 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 RNU4-21P-201ENST00000362802 126 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 RNU6-253P-201ENST00000384730 105 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 YWHAZP4-201ENST00000392459 708 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 XIST-201ENST00000416330 750 ntTSL 2 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AC023128.2-201ENST00000420880 1223 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 CCRL1P1-201ENST00000449542 1053 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 RN7SL390P-201ENST00000470634 284 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 MTND2P33-201ENST00000506452 1031 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 HNRNPKP5-201ENST00000515300 253 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 SCARNA21.2-201ENST00000516600 166 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 IGKV2D-38-201ENST00000518423 240 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 HNRNPA1P71-201ENST00000559135 950 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AC002310.3-201ENST00000569728 723 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AC010547.7-201ENST00000570323 333 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 VN1R92P-201ENST00000598511 928 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 MIR4302-201ENST00000638058 60 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 RN7SKP23-201ENST00000625159 4301 ntBASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ZC3H4Q9UPT8 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC110716.2-201ENST00000563865 3945 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AL157831.2-201ENST00000564681 3095 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms