Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 Y_RNA.256-201ENST00000364594 104 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 SNORA70.8-201ENST00000384231 136 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 VDAC2P1-201ENST00000399358 958 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 SUMO2P13-201ENST00000403109 272 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AC023128.2-201ENST00000420880 1223 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AL513321.1-201ENST00000441175 761 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 CYCSP44-201ENST00000448560 313 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AC005410.1-202ENST00000460347 485 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AC107015.1-201ENST00000466902 747 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 RPS14P7-201ENST00000473701 448 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 RPS17P11-201ENST00000474297 293 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AC066616.1-201ENST00000486795 413 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 STMN1P2-201ENST00000508435 439 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 DCAF13P2-201ENST00000514188 555 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 OR5F2P-201ENST00000532761 941 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AC010287.1-201ENST00000566916 357 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AL049840.6-201ENST00000604583 345 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AC004908.2-201ENST00000609090 574 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 HCG18-244ENST00000602516 2890 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
PDZRN3Q9UPQ7 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
PDZRN3Q9UPQ7 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC9.15□□□□□ -0.95
PDZRN3Q9UPQ7 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC9.15□□□□□ -0.95
PDZRN3Q9UPQ7 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC9.15□□□□□ -0.95
PDZRN3Q9UPQ7 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
PDZRN3Q9UPQ7 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
PDZRN3Q9UPQ7 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
PDZRN3Q9UPQ7 ZNF833P-201ENST00000424938 1494 ntBASIC9.15□□□□□ -0.95
PDZRN3Q9UPQ7 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
PDZRN3Q9UPQ7 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 DDX6P1-205ENST00000441966 1436 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 RNU6-468P-201ENST00000384003 109 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 Y_RNA.554-201ENST00000384672 102 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 MIR1266-201ENST00000408125 84 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 SNORA79B-201ENST00000410557 148 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 RN7SKP142-201ENST00000411236 328 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 VTA1P1-201ENST00000414044 866 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 RPS7P9-201ENST00000414704 586 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AC000041.1-201ENST00000439655 175 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 HMGB1P5-202ENST00000451497 985 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AC004890.1-201ENST00000461005 181 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 RN7SL393P-201ENST00000463588 296 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AC021006.1-201ENST00000489849 553 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 CCDC34P1-201ENST00000507441 517 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AC017037.1-201ENST00000508460 471 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AC146944.3-201ENST00000509969 371 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AP003392.2-201ENST00000527269 208 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AC091489.2-201ENST00000566263 604 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 BPTFP1-201ENST00000579209 492 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AL161729.3-201ENST00000603533 673 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AL359091.2-201ENST00000609303 556 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AC087894.3-201ENST00000623682 349 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AL590396.3-201ENST00000636334 300 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 AC007603.3-201ENST00000636915 979 ntBASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
PDZRN3Q9UPQ7 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms