Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AP001994.1-201ENST00000527539 826 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 PDCL3P1-201ENST00000534575 734 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AL049870.4-201ENST00000555741 486 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC090515.3-201ENST00000560431 315 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 MIR3159-201ENST00000584572 74 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC024940.5-201ENST00000622889 474 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 MFSD8-245ENST00000641743 948 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 SAMMSON-227ENST00000642114 1199 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AL080317.3-201ENST00000607434 4315 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 OR52B5P-204ENST00000641744 3467 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC100810.3-201ENST00000633189 2240 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AL022163.1-201ENST00000430261 1569 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 Y_RNA.89-201ENST00000363031 102 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 SNORA10-201ENST00000384084 133 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 RNU6-738P-201ENST00000384531 106 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 RPS3AP23-201ENST00000401762 784 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 OR5AW1P-201ENST00000426334 1006 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 MTCO2P12-201ENST00000427426 682 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 MTCYBP45-201ENST00000435243 565 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 EMC3-AS1-205ENST00000438698 534 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 Z80107.2-201ENST00000445127 392 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 FAR2P1-206ENST00000449736 709 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AL590326.1-201ENST00000460857 334 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 RPL34P33-201ENST00000486062 334 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 MTCYBP43-201ENST00000513621 740 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AF235103.2-201ENST00000525753 346 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AC018523.1-201ENST00000534211 512 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 RPL23AP90-201ENST00000603820 236 ntBASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CUEDC1Q9NWM3 THAP12P1-201ENST00000398672 2203 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms