Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 PNRC2P1-201ENST00000423940 420 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 RPL31P54-201ENST00000429803 370 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC018644.1-201ENST00000429934 551 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 TUBB4BP6-201ENST00000437576 479 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 SUMO1P3-201ENST00000439961 304 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 OR52Y1P-201ENST00000452418 828 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 RN7SL515P-201ENST00000463999 297 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 RPL34P34-201ENST00000465389 354 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 KLRA1P-201ENST00000503499 986 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 PDLIM1P4-201ENST00000504327 1006 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 RN7SKP233-201ENST00000517005 110 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 IGKV2-19-201ENST00000518132 283 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 OR6M3P-201ENST00000531567 700 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 OR52K3P-201ENST00000531655 943 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 CBX3P5-201ENST00000552017 521 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC078814.3-201ENST00000553036 491 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 NPIPB1P-202ENST00000588786 828 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AL133255.1-201ENST00000606374 441 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AL359880.1-201ENST00000621879 266 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC099667.1-201ENST00000624222 469 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 MIR6863-201ENST00000636112 90 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 ETV1-206ENST00000405218 3391 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 ZSWIM1-202ENST00000372523 2769 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 CAB39-207ENST00000614925 1619 ntTSL 5 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 NUMA1-201ENST00000351960 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 SULT1C2P1-201ENST00000427208 1875 ntTSL 2 BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 AC123769.1-201ENST00000530992 3192 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 PPP3CB-202ENST00000360663 3501 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 SAMM50P1-201ENST00000455403 1399 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 FAM13C-214ENST00000611933 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 SMG6-202ENST00000354901 3473 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 OR5P1P-201ENST00000299512 925 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 MAJIN-201ENST00000301896 843 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 SNORA51.2-201ENST00000364595 132 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 Y_RNA.422-201ENST00000384054 114 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 FABP5P1-201ENST00000423401 411 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 ACTR3P2-201ENST00000439585 1257 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 AC009237.4-201ENST00000441078 238 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 VDAC2P4-201ENST00000452925 711 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 DDX39BP2-208ENST00000453923 258 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 FGF7P3-201ENST00000454645 303 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 AC009269.1-202ENST00000484381 469 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 RN7SL775P-201ENST00000498361 336 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 AC021146.2-201ENST00000504736 556 ntBASIC7.51□□□□□ -1.21
COL25A1Q9BXS0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms