Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
PTPRMP28827 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTPRMP28827 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTPRMP28827 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
PTPRMP28827 MIR1193-201ENST00000408109 78 ntBASIC8.22□□□□□ -1.09
PTPRMP28827 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.22□□□□□ -1.09
PTPRMP28827 AP006289.1-201ENST00000538089 277 ntBASIC8.22□□□□□ -1.09
PTPRMP28827 EDDM3DP-201ENST00000554692 434 ntBASIC8.22□□□□□ -1.09
PTPRMP28827 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PTPRMP28827 AC011497.2-201ENST00000600255 639 ntBASIC8.22□□□□□ -1.09
PTPRMP28827 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.22□□□□□ -1.09
PTPRMP28827 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
PTPRMP28827 MIPEPP2-201ENST00000422560 1819 ntBASIC8.22□□□□□ -1.09
PTPRMP28827 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
PTPRMP28827 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTPRMP28827 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PTPRMP28827 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC8.22□□□□□ -1.09
PTPRMP28827 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.22□□□□□ -1.09
PTPRMP28827 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PTPRMP28827 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTPRMP28827 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PTPRMP28827 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC8.21□□□□□ -1.09
PTPRMP28827 AL031651.1-201ENST00000615357 1438 ntBASIC8.21□□□□□ -1.09
PTPRMP28827 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC8.21□□□□□ -1.09
PTPRMP28827 SNURFL-201ENST00000309296 343 ntBASIC8.21□□□□□ -1.09
PTPRMP28827 RPS6P23-201ENST00000413224 722 ntBASIC8.21□□□□□ -1.09
PTPRMP28827 KCTD10P1-201ENST00000434203 625 ntBASIC8.21□□□□□ -1.09
PTPRMP28827 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC8.21□□□□□ -1.09
PTPRMP28827 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.21□□□□□ -1.09
PTPRMP28827 RPL23AP72-201ENST00000492447 435 ntBASIC8.21□□□□□ -1.09
PTPRMP28827 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC8.21□□□□□ -1.09
PTPRMP28827 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC8.21□□□□□ -1.09
PTPRMP28827 AC024940.3-201ENST00000538551 316 ntBASIC8.21□□□□□ -1.09
PTPRMP28827 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC8.21□□□□□ -1.09
PTPRMP28827 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC8.21□□□□□ -1.09
PTPRMP28827 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.21□□□□□ -1.09
PTPRMP28827 AC103792.1-201ENST00000603591 919 ntBASIC8.21□□□□□ -1.09
PTPRMP28827 AL355974.3-201ENST00000617383 467 ntBASIC8.21□□□□□ -1.09
PTPRMP28827 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
PTPRMP28827 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC8.21□□□□□ -1.09
PTPRMP28827 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PTPRMP28827 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
PTPRMP28827 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
PTPRMP28827 AP003119.3-201ENST00000566747 4192 ntBASIC8.21□□□□□ -1.1
PTPRMP28827 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
PTPRMP28827 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC8.21□□□□□ -1.1
PTPRMP28827 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.21□□□□□ -1.1
PTPRMP28827 OR55B1P-203ENST00000641518 2602 ntBASIC8.21□□□□□ -1.1
PTPRMP28827 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
PTPRMP28827 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTPRMP28827 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTPRMP28827 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTPRMP28827 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTPRMP28827 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTPRMP28827 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
PTPRMP28827 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
PTPRMP28827 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
PTPRMP28827 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTPRMP28827 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC8.21□□□□□ -1.1
PTPRMP28827 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PTPRMP28827 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.2□□□□□ -1.1
PTPRMP28827 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPRMP28827 FAM3C2-201ENST00000312214 681 ntBASIC8.2□□□□□ -1.1
PTPRMP28827 GLULP6-201ENST00000399502 913 ntBASIC8.2□□□□□ -1.1
PTPRMP28827 MYL6P5-201ENST00000412707 459 ntBASIC8.2□□□□□ -1.1
PTPRMP28827 MGAT2P2-201ENST00000427194 797 ntBASIC8.2□□□□□ -1.1
PTPRMP28827 AC068287.1-201ENST00000430283 295 ntBASIC8.2□□□□□ -1.1
PTPRMP28827 RPS3AP38-201ENST00000435889 763 ntBASIC8.2□□□□□ -1.1
PTPRMP28827 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC8.2□□□□□ -1.1
PTPRMP28827 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC8.2□□□□□ -1.1
PTPRMP28827 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.2□□□□□ -1.1
PTPRMP28827 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC8.2□□□□□ -1.1
PTPRMP28827 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC8.2□□□□□ -1.1
PTPRMP28827 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC8.2□□□□□ -1.1
PTPRMP28827 AL391262.1-201ENST00000556558 1992 ntBASIC8.2□□□□□ -1.1
PTPRMP28827 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC8.2□□□□□ -1.1
PTPRMP28827 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC8.2□□□□□ -1.1
PTPRMP28827 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PTPRMP28827 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPRMP28827 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PTPRMP28827 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.2□□□□□ -1.1
PTPRMP28827 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPRMP28827 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPRMP28827 AL034546.1-201ENST00000623740 3693 ntBASIC8.2□□□□□ -1.1
PTPRMP28827 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPRMP28827 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPRMP28827 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC8.2□□□□□ -1.1
PTPRMP28827 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PTPRMP28827 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPRMP28827 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PTPRMP28827 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PTPRMP28827 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
PTPRMP28827 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
PTPRMP28827 AC093655.2-201ENST00000425735 631 ntBASIC8.19□□□□□ -1.1
PTPRMP28827 AC092106.1-201ENST00000444291 373 ntBASIC8.19□□□□□ -1.1
PTPRMP28827 TDGF1P1-201ENST00000445734 527 ntBASIC8.19□□□□□ -1.1
PTPRMP28827 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPRMP28827 AC026402.1-201ENST00000513642 170 ntBASIC8.19□□□□□ -1.1
PTPRMP28827 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPRMP28827 AL031320.1-201ENST00000604177 357 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms