Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ZNF887P-201ENST00000431363 1407 ntBASIC7.84□□□□□ -1.15
VARSP26640 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.84□□□□□ -1.15
VARSP26640 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.84□□□□□ -1.15
VARSP26640 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.84□□□□□ -1.15
VARSP26640 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.84□□□□□ -1.15
VARSP26640 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
VARSP26640 MTND5P1-201ENST00000445440 1375 ntBASIC7.84□□□□□ -1.16
VARSP26640 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.83□□□□□ -1.16
VARSP26640 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC7.83□□□□□ -1.16
VARSP26640 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
VARSP26640 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.83□□□□□ -1.16
VARSP26640 AC009237.3-203ENST00000442128 3551 ntBASIC7.83□□□□□ -1.16
VARSP26640 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
VARSP26640 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.83□□□□□ -1.16
VARSP26640 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
VARSP26640 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.83□□□□□ -1.16
VARSP26640 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 RNU6-1085P-201ENST00000363576 107 ntBASIC7.83□□□□□ -1.16
VARSP26640 AC093392.1-201ENST00000366280 340 ntBASIC7.83□□□□□ -1.16
VARSP26640 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
VARSP26640 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
VARSP26640 RNU2-42P-201ENST00000410697 113 ntBASIC7.83□□□□□ -1.16
VARSP26640 PDCL2P1-201ENST00000419302 352 ntBASIC7.83□□□□□ -1.16
VARSP26640 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC7.83□□□□□ -1.16
VARSP26640 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.83□□□□□ -1.16
VARSP26640 ACTP1-201ENST00000440793 383 ntBASIC7.83□□□□□ -1.16
VARSP26640 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC7.83□□□□□ -1.16
VARSP26640 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 AC233279.1-201ENST00000455300 423 ntBASIC7.83□□□□□ -1.16
VARSP26640 RPL38P1-201ENST00000460914 211 ntBASIC7.83□□□□□ -1.16
VARSP26640 RN7SL508P-201ENST00000464472 303 ntBASIC7.83□□□□□ -1.16
VARSP26640 PSAT1P4-201ENST00000466500 526 ntBASIC7.83□□□□□ -1.16
VARSP26640 AC007547.2-201ENST00000468802 360 ntBASIC7.83□□□□□ -1.16
VARSP26640 RN7SL333P-201ENST00000476398 297 ntBASIC7.83□□□□□ -1.16
VARSP26640 AC074386.1-201ENST00000476560 767 ntBASIC7.83□□□□□ -1.16
VARSP26640 GAPDHP39-201ENST00000481866 979 ntBASIC7.83□□□□□ -1.16
VARSP26640 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC7.83□□□□□ -1.16
VARSP26640 RN7SL864P-201ENST00000493457 285 ntBASIC7.83□□□□□ -1.16
VARSP26640 AC107956.2-201ENST00000496042 454 ntBASIC7.83□□□□□ -1.16
VARSP26640 Y_RNA.693-201ENST00000516641 110 ntBASIC7.83□□□□□ -1.16
VARSP26640 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.83□□□□□ -1.16
VARSP26640 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.83□□□□□ -1.16
VARSP26640 SSR2-215ENST00000529008 849 ntTSL 5 BASIC7.83□□□□□ -1.16
VARSP26640 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC7.83□□□□□ -1.16
VARSP26640 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.83□□□□□ -1.16
VARSP26640 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC7.83□□□□□ -1.16
VARSP26640 AC037471.2-201ENST00000564941 598 ntBASIC7.83□□□□□ -1.16
VARSP26640 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC7.83□□□□□ -1.16
VARSP26640 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC7.83□□□□□ -1.16
VARSP26640 AL163952.1-202ENST00000569625 600 ntBASIC7.83□□□□□ -1.16
VARSP26640 AL355375.2-201ENST00000574825 175 ntBASIC7.83□□□□□ -1.16
VARSP26640 VN1R80P-201ENST00000597126 338 ntBASIC7.83□□□□□ -1.16
VARSP26640 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.83□□□□□ -1.16
VARSP26640 AC007262.1-201ENST00000604099 321 ntBASIC7.83□□□□□ -1.16
VARSP26640 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.83□□□□□ -1.16
VARSP26640 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 RN7SL82P-201ENST00000611435 237 ntBASIC7.83□□□□□ -1.16
VARSP26640 AC108479.2-201ENST00000617314 601 ntBASIC7.83□□□□□ -1.16
VARSP26640 RN7SL628P-201ENST00000619139 237 ntBASIC7.83□□□□□ -1.16
VARSP26640 RN7SL113P-201ENST00000619959 299 ntBASIC7.83□□□□□ -1.16
VARSP26640 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC7.83□□□□□ -1.16
VARSP26640 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC7.83□□□□□ -1.16
VARSP26640 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
VARSP26640 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARSP26640 AC036108.4-201ENST00000611654 2516 ntBASIC7.83□□□□□ -1.16
VARSP26640 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
VARSP26640 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
VARSP26640 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC7.82□□□□□ -1.16
VARSP26640 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
VARSP26640 Z99129.4-201ENST00000624649 2435 ntBASIC7.82□□□□□ -1.16
VARSP26640 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC7.82□□□□□ -1.16
VARSP26640 AC117409.1-201ENST00000470499 1310 ntBASIC7.82□□□□□ -1.16
VARSP26640 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.82□□□□□ -1.16
VARSP26640 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 SEC63P2-201ENST00000503863 1939 ntBASIC7.82□□□□□ -1.16
VARSP26640 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.82□□□□□ -1.16
VARSP26640 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 AL080317.3-201ENST00000607434 4315 ntBASIC7.82□□□□□ -1.16
VARSP26640 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC7.82□□□□□ -1.16
VARSP26640 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms