Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AL136228.1-201ENST00000622221 319 ntBASIC5.49□□□□□ -1.53
HCN1O60741 SNX18P12-201ENST00000624821 759 ntBASIC5.49□□□□□ -1.53
HCN1O60741 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 UGT2B24P-201ENST00000514441 1597 ntBASIC5.49□□□□□ -1.53
HCN1O60741 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HCN1O60741 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HCN1O60741 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 BCORP1-203ENST00000513194 5093 ntBASIC5.49□□□□□ -1.53
HCN1O60741 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HCN1O60741 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.48□□□□□ -1.53
HCN1O60741 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HCN1O60741 ADAM24P-201ENST00000398655 2101 ntBASIC5.48□□□□□ -1.53
HCN1O60741 AC012254.3-201ENST00000591183 2117 ntBASIC5.48□□□□□ -1.53
HCN1O60741 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HCN1O60741 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
HCN1O60741 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HCN1O60741 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HCN1O60741 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HCN1O60741 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HCN1O60741 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HCN1O60741 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.48□□□□□ -1.53
HCN1O60741 RNA5SP273-201ENST00000362484 113 ntBASIC5.48□□□□□ -1.53
HCN1O60741 RN7SKP128-201ENST00000364270 303 ntBASIC5.48□□□□□ -1.53
HCN1O60741 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.48□□□□□ -1.53
HCN1O60741 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HCN1O60741 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HCN1O60741 SMC4P1-201ENST00000414479 527 ntBASIC5.48□□□□□ -1.53
HCN1O60741 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.48□□□□□ -1.53
HCN1O60741 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HCN1O60741 AL136455.1-201ENST00000441083 1240 ntBASIC5.48□□□□□ -1.53
HCN1O60741 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.48□□□□□ -1.53
HCN1O60741 AL512593.1-201ENST00000444758 779 ntBASIC5.48□□□□□ -1.53
HCN1O60741 AL445466.1-201ENST00000448432 357 ntBASIC5.48□□□□□ -1.53
HCN1O60741 AC016027.4-201ENST00000450866 277 ntBASIC5.48□□□□□ -1.53
HCN1O60741 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.48□□□□□ -1.53
HCN1O60741 HLA-DPA3-207ENST00000454398 229 ntBASIC5.48□□□□□ -1.53
HCN1O60741 ACA64.4-201ENST00000459070 127 ntBASIC5.48□□□□□ -1.53
HCN1O60741 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.48□□□□□ -1.53
HCN1O60741 AL122020.1-201ENST00000472287 459 ntBASIC5.48□□□□□ -1.53
HCN1O60741 TOMM22P4-201ENST00000511318 336 ntBASIC5.48□□□□□ -1.53
HCN1O60741 Y_RNA.667-201ENST00000516212 107 ntBASIC5.48□□□□□ -1.53
HCN1O60741 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.48□□□□□ -1.53
HCN1O60741 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.48□□□□□ -1.53
HCN1O60741 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.48□□□□□ -1.53
HCN1O60741 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.48□□□□□ -1.53
HCN1O60741 AC119403.2-201ENST00000590960 598 ntBASIC5.48□□□□□ -1.53
HCN1O60741 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.48□□□□□ -1.53
HCN1O60741 AC100767.2-201ENST00000604840 693 ntBASIC5.48□□□□□ -1.53
HCN1O60741 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.48□□□□□ -1.53
HCN1O60741 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.48□□□□□ -1.53
HCN1O60741 AL357562.1-201ENST00000624911 609 ntBASIC5.48□□□□□ -1.53
HCN1O60741 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.48□□□□□ -1.53
HCN1O60741 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HCN1O60741 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.48□□□□□ -1.53
HCN1O60741 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HCN1O60741 AC020633.1-201ENST00000468439 2247 ntBASIC5.48□□□□□ -1.53
HCN1O60741 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HCN1O60741 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HCN1O60741 MTCO1P7-201ENST00000419523 1542 ntBASIC5.48□□□□□ -1.53
HCN1O60741 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HCN1O60741 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.48□□□□□ -1.53
HCN1O60741 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.48□□□□□ -1.53
HCN1O60741 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.47□□□□□ -1.53
HCN1O60741 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
HCN1O60741 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
HCN1O60741 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HCN1O60741 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HCN1O60741 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HCN1O60741 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.47□□□□□ -1.53
HCN1O60741 U3.10-201ENST00000364459 214 ntBASIC5.47□□□□□ -1.53
HCN1O60741 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HCN1O60741 MIR323B-201ENST00000385269 82 ntBASIC5.47□□□□□ -1.53
HCN1O60741 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HCN1O60741 BX284632.2-201ENST00000421091 399 ntBASIC5.47□□□□□ -1.53
HCN1O60741 AL035660.1-201ENST00000422041 222 ntBASIC5.47□□□□□ -1.53
HCN1O60741 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.47□□□□□ -1.53
HCN1O60741 RPS27AP6-201ENST00000427962 448 ntBASIC5.47□□□□□ -1.53
HCN1O60741 CDY8P-201ENST00000428380 1279 ntBASIC5.47□□□□□ -1.53
HCN1O60741 CDY20P-201ENST00000447528 1279 ntBASIC5.47□□□□□ -1.53
HCN1O60741 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.47□□□□□ -1.53
HCN1O60741 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.47□□□□□ -1.53
HCN1O60741 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HCN1O60741 RN7SL193P-201ENST00000491708 276 ntBASIC5.47□□□□□ -1.53
HCN1O60741 RNA5SP438-201ENST00000516561 112 ntBASIC5.47□□□□□ -1.53
HCN1O60741 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.47□□□□□ -1.53
HCN1O60741 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.47□□□□□ -1.53
HCN1O60741 IGKV2-4-201ENST00000523070 340 ntBASIC5.47□□□□□ -1.53
HCN1O60741 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.47□□□□□ -1.53
HCN1O60741 AP000648.1-201ENST00000529682 397 ntBASIC5.47□□□□□ -1.53
HCN1O60741 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.47□□□□□ -1.53
HCN1O60741 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.47□□□□□ -1.53
HCN1O60741 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.47□□□□□ -1.53
HCN1O60741 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.47□□□□□ -1.53
HCN1O60741 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.47□□□□□ -1.53
HCN1O60741 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms