Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB1Q9Y5F3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 SNORD16-201ENST00000362803 99 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC234772.1-201ENST00000377927 937 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 RNU6-468P-201ENST00000384003 109 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 RNU6-316P-201ENST00000391027 107 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AP003170.5-201ENST00000397185 335 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 U3.43-201ENST00000410734 213 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC096533.1-201ENST00000411645 353 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC092447.3-201ENST00000426027 686 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 RN7SL254P-201ENST00000460609 284 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 RPL17P2-201ENST00000491913 451 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC011411.1-201ENST00000509592 876 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC021146.7-201ENST00000509604 775 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 NPM1P21-201ENST00000513394 762 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 ZNF519P4-201ENST00000514008 125 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 COX6B1P4-201ENST00000519826 484 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 OR4A40P-201ENST00000533878 948 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC090826.1-203ENST00000569235 490 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 MTCO2P2-201ENST00000591258 225 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AL589863.1-201ENST00000595383 631 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 RPP40P2-201ENST00000603596 712 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC009974.1-201ENST00000608881 455 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC006946.3-201ENST00000609791 756 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC004836.1-201ENST00000623032 634 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 LINC02495-203ENST00000636704 242 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AL357140.4-201ENST00000636827 412 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC105749.1-201ENST00000631338 2008 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AC003985.2-201ENST00000562268 1669 ntBASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB1Q9Y5F3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AC110373.1-201ENST00000505994 3505 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AC008432.1-201ENST00000615912 1320 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 MTHFD2P5-201ENST00000320415 844 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 SNORD8-201ENST00000363915 110 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 RPS21P8-201ENST00000413365 247 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms