Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 PTPN20-201ENST00000374218 2872 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 RNU5E-1-201ENST00000362477 120 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 Y_RNA.373-201ENST00000365600 103 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 RACK1-201ENST00000376817 965 ntTSL 5 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 Y_RNA.414-201ENST00000384011 101 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 RNY1P14-201ENST00000384426 108 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 RNU4-6P-201ENST00000410804 122 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 RPL34P27-201ENST00000428810 349 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 BRWD1P3-201ENST00000428816 390 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AF228730.2-201ENST00000438784 848 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 PPIA-203ENST00000451562 544 ntTSL 2 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 RN7SL854P-201ENST00000459767 295 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AC018695.1-201ENST00000484096 664 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 RN7SL124P-201ENST00000498656 285 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AL031073.1-201ENST00000503029 1139 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AC113352.1-201ENST00000513196 666 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AC112192.1-201ENST00000515086 553 ntTSL 4 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 RNU4-29P-201ENST00000515943 174 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AP004607.5-201ENST00000532034 217 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AC126177.6-201ENST00000550420 1009 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 MIR5705-201ENST00000579870 89 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AC103949.1-201ENST00000582064 457 ntTSL 3 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 PDLIM1P2-201ENST00000582923 607 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AL670379.11-201ENST00000604059 253 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AL670379.10-201ENST00000604330 253 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AL670379.12-201ENST00000605291 253 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AL670379.9-201ENST00000605428 253 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 MIR6723-201ENST00000621981 89 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AC025279.3-201ENST00000622398 104 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AL109806.1-201ENST00000623967 1248 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 OR10H3-202ENST00000641646 1029 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 PCDH15-223ENST00000495484 1896 ntTSL 5 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 TRIM51EP-201ENST00000524374 1516 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 CD200-201ENST00000315711 2129 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AP005230.1-205ENST00000639316 2015 ntTSL 5 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 FLJ36000-201ENST00000612344 3801 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 OTOA-202ENST00000388956 3466 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 OR11H5P-202ENST00000641612 1325 ntBASIC8.27□□□□□ -1.09
LHX6Q9UPM6 TCL6-207ENST00000483087 2194 ntTSL 2 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AL442128.2-201ENST00000620246 1824 ntBASIC8.26□□□□□ -1.09
LHX6Q9UPM6 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 AL359682.1-201ENST00000555328 2490 ntTSL 2 BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 AL591848.3-201ENST00000570141 2968 ntBASIC8.26□□□□□ -1.09
LHX6Q9UPM6 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.26□□□□□ -1.09
LHX6Q9UPM6 U91328.2-201ENST00000606723 4130 ntTSL 2 BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 TCF7-202ENST00000378560 2929 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 SNORA20.2-201ENST00000383922 131 ntBASIC8.26□□□□□ -1.09
LHX6Q9UPM6 Y_RNA.785-201ENST00000384290 109 ntBASIC8.26□□□□□ -1.09
LHX6Q9UPM6 Y_RNA.530-201ENST00000384587 101 ntBASIC8.26□□□□□ -1.09
LHX6Q9UPM6 SNORD37.1-201ENST00000390968 65 ntBASIC8.26□□□□□ -1.09
LHX6Q9UPM6 AL445529.1-201ENST00000398713 389 ntBASIC8.26□□□□□ -1.09
LHX6Q9UPM6 BTBD10P2-201ENST00000404779 676 ntBASIC8.26□□□□□ -1.09
LHX6Q9UPM6 RNU6-193P-201ENST00000410977 107 ntBASIC8.26□□□□□ -1.09
LHX6Q9UPM6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 HBBP1-201ENST00000433329 439 ntBASIC8.26□□□□□ -1.09
LHX6Q9UPM6 SPAG11A-205ENST00000434307 777 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 AL731892.1-201ENST00000437364 1192 ntBASIC8.26□□□□□ -1.09
LHX6Q9UPM6 AL592114.2-201ENST00000440142 532 ntBASIC8.26□□□□□ -1.09
LHX6Q9UPM6 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC8.26□□□□□ -1.09
LHX6Q9UPM6 RNU6-1132P-201ENST00000459214 107 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms