Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 SCARNA18.1-201ENST00000516330 83 ntBASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 IGHV3-57-201ENST00000520143 280 ntBASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 OSBPL9P5-201ENST00000542581 171 ntBASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 AC079600.1-201ENST00000550326 297 ntBASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 AP004372.1-201ENST00000604842 844 ntBASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 AL513218.1-201ENST00000606527 391 ntBASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 MIR6793-201ENST00000612376 63 ntBASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 AC011815.2-201ENST00000618230 2021 ntBASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 ZNF90P1-201ENST00000480493 1951 ntBASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 AP003119.3-201ENST00000566747 4192 ntBASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ZNRF3Q9ULT6 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 RBMY1HP-201ENST00000382759 1389 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AC062022.1-201ENST00000451026 1684 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 RNU6-481P-201ENST00000384194 107 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AP002784.2-201ENST00000397300 549 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 ATP5F1P2-201ENST00000398143 760 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 RN7SKP293-201ENST00000411389 296 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 SLC4A1APP1-201ENST00000419995 602 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 MTCYBP29-201ENST00000436327 1006 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 VN1R110P-201ENST00000438988 971 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AC064862.4-201ENST00000442180 334 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 MYO5BP2-201ENST00000449815 1277 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AC021087.2-201ENST00000504656 1203 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AC112191.2-201ENST00000522428 333 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 MIR4489-201ENST00000578869 62 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AC021171.1-201ENST00000603137 706 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AC080013.6-201ENST00000606185 215 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AP005431.1-201ENST00000618479 319 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AC004943.3-201ENST00000624116 600 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AC019080.5-201ENST00000624891 757 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 AF287957.1-201ENST00000607368 1595 ntBASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZNRF3Q9ULT6 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.6□□□□□ -1.19
ZNRF3Q9ULT6 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
ZNRF3Q9ULT6 AL359715.3-201ENST00000569267 2123 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms